Gene Rleg_5388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5388 
Symbol 
ID8007346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp800351 
End bp801409 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content64% 
IMG OID644822292 
ProductABC transporter related 
Protein accessionYP_002973552 
Protein GI241113717 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACA TTGTCATCGA CCGCATCCGC AAGAGCTTCG GAGCCTTCCA GGCGCTGAAA 
GAGGTCTCGC TGACGATCAA CGACGGCGAA TTCGTCTCGC TGCTCGGTCC GTCCGGCTGC
GGCAAGACCA CGCTGCTGCG CATCATCGCC GGCCTCGAGA CCGCAACATC GGGAGATATC
CGCATCGGCG ACAAGTCGGT GATCGGCTTG CCTCCCAAGG ATCGCGGCCT TGCGATGGTC
TTCCAGAACT ACGCCGTCTT TCCGCACATG ACGGTCTATG AGAACGTCGC CTTCGGACTG
CGGATGCAGA AGGCCGACGA CGCCAGGGTG AAGGCGCAGG TCGAGAAGGC CGCCGGCCTC
CTGCATATCG AGCAATATCT CGACCGCTAC CCGAACAAGC TTTCCGGCGG CCAGCGCCAG
CGCGTCGCGG TCGCTCGCGC CCTTGCCGTC GAACCGAAGG TTCTGCTGAT GGACGAGCCG
CTTTCGAACC TCGACGCGCT GCTCCGCCTC GAAATGCGCA CCGAACTCAA GACGGTGCTG
CAATCGGCCG GCACCACGAC GATCTACGTC ACCCACGACC AGACCGAAGC CATGGGCCTT
TCCGACCGCA TTGCCGTCAT GCATGGCGGC GTGGTCGAAC AGGTCGGCCA TCCGGTCGAG
ATCTACAACC ACCCGGCGAC ACGTTTCGTC GGCGGCTTCA TCGGCAACCC GCCGATGAAT
TTCATCAAGG TGCCGGTGAC AAACAGCCAG GTGGCGGCAG GCGCCGTACA GCTTGTCGCG
CCGCGGGGGT CCGGCAATGA AGTGATCCTT GGCCTGCGCG GCGAAGCCGT CGAACTCGCG
CCGCTGCCGC AGGGTCTCGA AATGCGGGTG CGCGTTGCCG AACCGATGGG CTCGCACCTG
CTTCTGACCG GCTCGATCCA CGACCAGCCG GTGCGCGTCA TCCTGCCGGC CTCGGAGACC
GTAAAGAGCG GCGACACGAT CGGTCTGAAG CTCGACCAGA AGCGCATCAC CTGGCTTTCA
CCCGAAAGCG GCAAGTCCTT TCCGGCCCTC TTGGCCTAA
 
Protein sequence
MANIVIDRIR KSFGAFQALK EVSLTINDGE FVSLLGPSGC GKTTLLRIIA GLETATSGDI 
RIGDKSVIGL PPKDRGLAMV FQNYAVFPHM TVYENVAFGL RMQKADDARV KAQVEKAAGL
LHIEQYLDRY PNKLSGGQRQ RVAVARALAV EPKVLLMDEP LSNLDALLRL EMRTELKTVL
QSAGTTTIYV THDQTEAMGL SDRIAVMHGG VVEQVGHPVE IYNHPATRFV GGFIGNPPMN
FIKVPVTNSQ VAAGAVQLVA PRGSGNEVIL GLRGEAVELA PLPQGLEMRV RVAEPMGSHL
LLTGSIHDQP VRVILPASET VKSGDTIGLK LDQKRITWLS PESGKSFPAL LA