| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5377 |
|---|
| Symbol | |
|---|
| ID | 8007335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 787739 |
|---|
| End bp | 788569 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644822281 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002973541 |
|---|
| Protein GI | 241113706 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.715682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.9196 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTGGG GGCAGATCGC AACCGGTGCC ATCGCGATTT CAGCGCTGGC CTTCTTTGCG
CTCGTCGTCG GGCAGAGCCA GAGCATCCAG TGGTCCGAGA TCCCCCGCTA TCTGGTGGAT
CCTTCGATCC TGCGCGGCGT GCTGCTGACG CTTGAACTGA CGGCTGGCGC CATGGTGTTC
GGCATCGTGC TCGGATGCCT GCTGGCGCTG ATGGCGACGA GCCAGAACCC GGTTCTCAAG
GTGATCGCCG CCGGCTTCGT CTGGTGGTTT CGCGGCGTGC CGCTGATTGT CCAGATCTTC
TTCTGGTTCA ATATCGCCCT CTTCATCCCG CAGGTCGGGA TGGGAAGCTT CACCATTTCG
ATCAACGATC TGGTGACACC GGCCCTGGCC GGCTTCCTCG CACTCGGACT GCACGAAGCC
GCGAACATGT CGGAGATCAT CCGCGGTGGC CTGGTCGCGG TCGATCGCGG CCAGCGCGAG
GCGGCCACGG CGCTCGGGCT GAAAAAGACA CAGACTTTTC TCACCGTCAT CATGCCCCAG
GCCACGCGTA TCATCGTGCC GCCGACCGGG AACCAGGCCA TCGGCATGCT CAAGGCCACT
GCCATCGTCT CGGTCATCGG CATGCAGGAT CTGCTGACGC AGGCCCAGGC GATCTACGCC
CGGAACTTCC TGGTCATCGA ACTGCTGTTC GTCGCCTCGA TCTGGTACCT CGCCATCACG
AGCGTGGCAT CCATAGGCCA GCACTATCTC GAAAAGCGTC TCGTTCCGAC AGGCCGGACA
GCAGAGAAGC CTCGCTCCCG GAGGGGCGTG ATCGCGGATC GATCGTCGTG A
|
|---|
| Protein sequence | MRWGQIATGA IAISALAFFA LVVGQSQSIQ WSEIPRYLVD PSILRGVLLT LELTAGAMVF
GIVLGCLLAL MATSQNPVLK VIAAGFVWWF RGVPLIVQIF FWFNIALFIP QVGMGSFTIS
INDLVTPALA GFLALGLHEA ANMSEIIRGG LVAVDRGQRE AATALGLKKT QTFLTVIMPQ
ATRIIVPPTG NQAIGMLKAT AIVSVIGMQD LLTQAQAIYA RNFLVIELLF VASIWYLAIT
SVASIGQHYL EKRLVPTGRT AEKPRSRRGV IADRSS
|
|---|
| |