Gene Rleg_5373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5373 
Symbol 
ID8007331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp783118 
End bp783945 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content64% 
IMG OID644822277 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002973537 
Protein GI241113702 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGA GCGGCTTCCC ATACGTCCTG CCGATGCTGT TGCTTTCCGT GGCGTTCTTC 
GCAACGCCGC TCGCCGTCCT CGTCGGTTTC AGCTTCGCCG GTCCCGGCGG AGCGACCCTC
GAACATTATG CCCGCTTCTT CGGCGACGCG TTCAATTTCC GCGTCCTCGT CAATACTGCA
AGGCTCGGCC TCGAAACCGT CATCGGCACG ACCTTGCTCG GCGTGCCGAT CGCGCTTCTC
TACTGGCATG GCGGCAGGAA CCTGCGGCAG GTGCTGATCT TCCTGACGCT CATTCCGATG
CTGACCAGCA ATGTCGTGCG CACCTTCGCC TGGATCGTCA TCCTCGGGCG CCAGGGGCCG
ATCAGCGAAG CGCTGGTTGG GCTCGGCCTG ACGGGCATGC CGACGAGCCT TCTGTTTACC
GAACTCGGCC TTGTGATGGC CATGTGCCAG ATCGATCTGC CGCTGATCAT CCTGCCGCTG
ATCGCGATCC TGTCACGTAC GCCGGTGCAA CTGACGGAAG CCGCCCAGGT TTCCGGCGCC
GGTCCCTGGC GCATATTTGT CACCGTGCTT CTGCCGCTGA TGCTGCCGGG CCTGCTGGCA
GGCTGGATCC TGGTCTTTGC CAGCACCAGC AGCTCCTTCG TTACCCAGGC CGTCATCGGC
GGAGCGCGCA ACGTCTATGT TCCGCAGCTG ATCTACCGCG AAGTCGGCAC GCTGTTCGAC
TGGCCGCTGG CCTCGGCCAT CGCCGTCGTC CTCCTGCTGT CCACCGGCTG CCTGCTGGTC
GCCCTTACCA TGATGTCCCG TCACAGGAGG TTGGTCGGTC ATGCCTGA
 
Protein sequence
MKASGFPYVL PMLLLSVAFF ATPLAVLVGF SFAGPGGATL EHYARFFGDA FNFRVLVNTA 
RLGLETVIGT TLLGVPIALL YWHGGRNLRQ VLIFLTLIPM LTSNVVRTFA WIVILGRQGP
ISEALVGLGL TGMPTSLLFT ELGLVMAMCQ IDLPLIILPL IAILSRTPVQ LTEAAQVSGA
GPWRIFVTVL LPLMLPGLLA GWILVFASTS SSFVTQAVIG GARNVYVPQL IYREVGTLFD
WPLASAIAVV LLLSTGCLLV ALTMMSRHRR LVGHA