Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5373 |
Symbol | |
ID | 8007331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | - |
Start bp | 783118 |
End bp | 783945 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644822277 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002973537 |
Protein GI | 241113702 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGGCGA GCGGCTTCCC ATACGTCCTG CCGATGCTGT TGCTTTCCGT GGCGTTCTTC GCAACGCCGC TCGCCGTCCT CGTCGGTTTC AGCTTCGCCG GTCCCGGCGG AGCGACCCTC GAACATTATG CCCGCTTCTT CGGCGACGCG TTCAATTTCC GCGTCCTCGT CAATACTGCA AGGCTCGGCC TCGAAACCGT CATCGGCACG ACCTTGCTCG GCGTGCCGAT CGCGCTTCTC TACTGGCATG GCGGCAGGAA CCTGCGGCAG GTGCTGATCT TCCTGACGCT CATTCCGATG CTGACCAGCA ATGTCGTGCG CACCTTCGCC TGGATCGTCA TCCTCGGGCG CCAGGGGCCG ATCAGCGAAG CGCTGGTTGG GCTCGGCCTG ACGGGCATGC CGACGAGCCT TCTGTTTACC GAACTCGGCC TTGTGATGGC CATGTGCCAG ATCGATCTGC CGCTGATCAT CCTGCCGCTG ATCGCGATCC TGTCACGTAC GCCGGTGCAA CTGACGGAAG CCGCCCAGGT TTCCGGCGCC GGTCCCTGGC GCATATTTGT CACCGTGCTT CTGCCGCTGA TGCTGCCGGG CCTGCTGGCA GGCTGGATCC TGGTCTTTGC CAGCACCAGC AGCTCCTTCG TTACCCAGGC CGTCATCGGC GGAGCGCGCA ACGTCTATGT TCCGCAGCTG ATCTACCGCG AAGTCGGCAC GCTGTTCGAC TGGCCGCTGG CCTCGGCCAT CGCCGTCGTC CTCCTGCTGT CCACCGGCTG CCTGCTGGTC GCCCTTACCA TGATGTCCCG TCACAGGAGG TTGGTCGGTC ATGCCTGA
|
Protein sequence | MKASGFPYVL PMLLLSVAFF ATPLAVLVGF SFAGPGGATL EHYARFFGDA FNFRVLVNTA RLGLETVIGT TLLGVPIALL YWHGGRNLRQ VLIFLTLIPM LTSNVVRTFA WIVILGRQGP ISEALVGLGL TGMPTSLLFT ELGLVMAMCQ IDLPLIILPL IAILSRTPVQ LTEAAQVSGA GPWRIFVTVL LPLMLPGLLA GWILVFASTS SSFVTQAVIG GARNVYVPQL IYREVGTLFD WPLASAIAVV LLLSTGCLLV ALTMMSRHRR LVGHA
|
| |