| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5372 |
|---|
| Symbol | |
|---|
| ID | 8007330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 782304 |
|---|
| End bp | 783125 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644822276 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002973536 |
|---|
| Protein GI | 241113701 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.736363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATC GTCGCGAAAA TCCCATTCCC GTCATGCTCT ACAAGGCATT CGTCTACGGT
TTCGGCGGGC TCTGCGTCAT CTATCTCGTC GCACCGATCG TGATTGCGCT GACGATGTCG
TTCACCTCGG GGCAGACACT GAAATATCCG CCGCAGGGCT TTTCGCTCAG GTGGTACGCG
GCGCTGCTCG ATCCGGTGCG ATCGGCGACC GAACATATCG CCGCCTGGAA CTCGCTGAAG
ATTGCCGGCC TTGCCGTCCT CGGATCGCTG ATCTTTGCGG TTCCGGCAAC CATCGGCATG
ACGCGCATGA AGCGCAGCAC CGCCGGCACC ATCGAGCCGC TGCTGCTCGC CCCGCTCGTC
CTGCCGAGCC TGGTCTACGG CCTTGCCGCC TTAATCGTCG CCAACTTCAT CGGCTTCAAG
CCGTCGCTCT GGCTGACCGT ATCAGGCCAT GTCGTGGTCT TCGGGCCGCT GATGTACCGC
GCCGCCTCAG TCGTCGCCCA GGGTCTCAAT CCCTCGCTTG CCGAGGCATC GACGACGATG
GGCGCGAGCT GGTTCAGGAC ACTGCGGCGC GTCACCCTGC CGCTGCTGAT GCCCGGCATT
CTGGCCGGGG CATTCCTCGT CTTCATCCAG TCGCTCGACA ATGTGTCGGT ATCGCTTTTC
CTCGCCGATG CCCGAACGAC CGTCTTGCCG CTGCGCATGT TCGCTTTGAT CGAGGAATCC
CTCGATGTGC GCGTCGCGGC AATCTCCGGA ATTCTGATCG CCGTGACGCT GGTCGGACTG
CTGGTTGCCC GGCGCGTTCT CGCGCCGCCG CGGCCGGCCT GA
|
|---|
| Protein sequence | MPDRRENPIP VMLYKAFVYG FGGLCVIYLV APIVIALTMS FTSGQTLKYP PQGFSLRWYA
ALLDPVRSAT EHIAAWNSLK IAGLAVLGSL IFAVPATIGM TRMKRSTAGT IEPLLLAPLV
LPSLVYGLAA LIVANFIGFK PSLWLTVSGH VVVFGPLMYR AASVVAQGLN PSLAEASTTM
GASWFRTLRR VTLPLLMPGI LAGAFLVFIQ SLDNVSVSLF LADARTTVLP LRMFALIEES
LDVRVAAISG ILIAVTLVGL LVARRVLAPP RPA
|
|---|
| |