| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5369 |
|---|
| Symbol | |
|---|
| ID | 8007327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 779173 |
|---|
| End bp | 780039 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644822273 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002973533 |
|---|
| Protein GI | 241113698 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.239018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATA CCCAAAGCCG CGGCGAATGG ATTGGATCCC GAGGGCAGTT CTTGATCGAG
CGTCACATCG CTGATGCGAT GGCGGCACCG CATTGGCACG ACCACGTTGA ATTAAACCTG
CTCATGGAAG GCCGGATGAC CTACCTTTTT AATGGAAGGC AGGAACAGGT TGAGGCCGGC
CGCCTGGTTT TATTCTGGGC CGCAATTCCT CATCAGACGA TCGCTGTTGC CGAAAACGCG
CCGCTCGTAT GCCTCTATCT TCCCCTTATC GATTTCCTGG GTCTGCCGGT GGACAGAAAG
GCCAGGCAGT CGATCATGCA GGGGAGATTT CTGGCGCAGG CAAATCAGGA AACGATGGAT
GCGTTGACAC TCCCACGATG GGAAAAGGAA TGGCAATTCG GCAGTGCGGC AAGACGGAAA
TTGATCGTCG AGGAGGTTCG ACTGCGAATA CGGCGTCTGA TTCTCGACAA TGCCGAAATC
GACAATTCGC CAACCCATGT CTCTCCGACA TCGTTGGCCG GCCAGGCAGT GCGCCACGTC
GAGCTGCTGA TCGACCTGAT CAATACCCGA TACGCAGATC CGATTAGCGT AGCCGATCTC
GCGAAGCTTG CGGAAATGCA TCCAAGCACC GCCAACAGCG CTTTCCGAAA GGTTTTGGGA
ATATCAGTCA ACGAATACCT GACCCGACAT CGGATTGCCC GGGCGATGCA GCTACTGACG
GACACGGAGG ATCCCGTCCT CCAGATCGGC TTTGACTGCG GGTTTGGTTC CAGCAGTCGC
TTTTACGAGA TTTTCAAGGA GCGAACGGGT ACGACCCCCC GTCATTTCCG GGAAGCGGTG
AACTCCAGGA ACACTCCGGC GCCTTGA
|
|---|
| Protein sequence | MKYTQSRGEW IGSRGQFLIE RHIADAMAAP HWHDHVELNL LMEGRMTYLF NGRQEQVEAG
RLVLFWAAIP HQTIAVAENA PLVCLYLPLI DFLGLPVDRK ARQSIMQGRF LAQANQETMD
ALTLPRWEKE WQFGSAARRK LIVEEVRLRI RRLILDNAEI DNSPTHVSPT SLAGQAVRHV
ELLIDLINTR YADPISVADL AKLAEMHPST ANSAFRKVLG ISVNEYLTRH RIARAMQLLT
DTEDPVLQIG FDCGFGSSSR FYEIFKERTG TTPRHFREAV NSRNTPAP
|
|---|
| |