| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5360 |
|---|
| Symbol | |
|---|
| ID | 8007318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 769364 |
|---|
| End bp | 770434 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644822264 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002973524 |
|---|
| Protein GI | 241113689 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.220389 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.603091 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCAG TAAGTGTGGC GAATGCCCGC AAGAGCTACG GTCACTTCGA AGTTCTGCAT
GGTGTGGATA TTGATATCCA AGACGGCGAA TTCGTTATCC TGGTCGGTCC GTCCGGGTGC
GGGAAGTCGA CATTGTTGCG GATGATCGCC GGCCTCGAAG AGATTTCGGC TGGTCGGATT
TCGATCGGCA GCAAGGTCGT AAACAATGTC GCGCCAAAAG AACGCGATAT CGCAATGGTT
TTCCAGTCCT ATGCGCTCTA CCCCCACCTG ACAGTCGAGG CGAATATGGG TTTTTCGCTG
AAGCTGGCCA AAGCACCCAA GGAACAGACC AGGCAGCGTG TTCGAGCAGC CGCTGAAATT
CTGGGGCTCG AGCATCTGCT CGACAGATAT CCGAAAAATT TGTCGGGTGG CCAACGCCAA
CGTGTGGCGA TGGGCCGTGC CATCGTCAGA AATCCGCAGG TCTTCCTGTT TGACGAACCA
TTGTCGAACC TGGACGCAAA GCTGCGGGTG CAGATGCGTT CGGAAATCAA ACAGCTGCAT
CAGCGACTGA AGACAACGAC CATTTACGTC ACCCACGATC AGATCGAGGC CATGACGATG
GCCGATCGGA TTGTTGTGAT GCGGGACGGC TTCGTCGAGC AGATAGGCTC GCCGCTCGAT
CTCTACGACC GGCCTGCAAA CCTTTTCGTG GCGGGCTTCG TCGGTTCGCC GGCGATGAAC
CTTGTTCGAG GCCAGGTCAG CCCTTCGGGG CCACTGGAGT TGATCGCGGA CGGCGGAGGG
AGGCTGCCGC TGCCGGAAGC GGCGTCATTG GAACGCGGCG CGCAGCTTAT CTACGGCATT
CGCCCCGAAC ATCTCACAAT CGGACACGGT CCAGTTGCCG CTGAGGTCGT CCTCGTTGAG
CCTACCGGTG CTGAGATCCA GATAACCACG AAGTTTGGCG CCGATCACCT CGTTGCGACG
GTAAGAGAAC GCCTTGATCT GCGCGCCGGT GATCAGATCG TCATTGCCCC AGACCTTAGC
AAACTGCATC TGTTCGACGC AAAAACCGAA AAGCGGTTGA GGTCCGTCTA A
|
|---|
| Protein sequence | MASVSVANAR KSYGHFEVLH GVDIDIQDGE FVILVGPSGC GKSTLLRMIA GLEEISAGRI
SIGSKVVNNV APKERDIAMV FQSYALYPHL TVEANMGFSL KLAKAPKEQT RQRVRAAAEI
LGLEHLLDRY PKNLSGGQRQ RVAMGRAIVR NPQVFLFDEP LSNLDAKLRV QMRSEIKQLH
QRLKTTTIYV THDQIEAMTM ADRIVVMRDG FVEQIGSPLD LYDRPANLFV AGFVGSPAMN
LVRGQVSPSG PLELIADGGG RLPLPEAASL ERGAQLIYGI RPEHLTIGHG PVAAEVVLVE
PTGAEIQITT KFGADHLVAT VRERLDLRAG DQIVIAPDLS KLHLFDAKTE KRLRSV
|
|---|
| |