Gene Rleg_5354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5354 
Symbol 
ID8007312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp765060 
End bp765974 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content59% 
IMG OID644822258 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002973518 
Protein GI241113683 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.440678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGTT TCATCGGCAA ACGCGCGATC GCCAGTGGCG TATCGCTCGT GGTGCTTATC 
GTCATCGTGT TCTTCCTGTC CCGGCTGACG GGCGATCCGA CCGACCTCTA TCTGCCGATC
GATGCGACCA CCGAAATGCG CCAGCAATTC CGTGAGATGA ACGGTTTCAA CGATCCGTTG
ATCATCCAGT TCGGCCGTTA TGTCTCGGAT CTTGCCCAGG GCAATTTCGG TCAGTCACTG
CGGCAGGCCC GTCCGGCCAT GGATGTCGTG CTGGAGGCCT TCGTCTGGAC CTTCTGGCTG
GCTGCCATCA CCATGGTGCT GGTCACGATC GCCGCGATCG TCATCGGTTC GCTTGCGGCG
TTTCGCGTCG GCGGCGTCTT CGACCGTCTC GCCACCTTCT TCTCGCTGAT CGGCGCTGCG
GCGCCGGATT TCTGGCTGGC CATCGTGGCA ATCGTCATTT TCGCCGTTAA ACTGCATGTC
CTGCCGACAT CGGGAACGGG AACTTTCTGG CACTGGGTCC TGCCGGTCAG CGTGCTGTTC
ATCCGGCCTT TCGGCCTGAT CCTGCAGGTG GTCCGAGGCT CGATGATCAG TGTTCTGTCT
TCCGCCTATG TGAAGACGGC CCGCGCCAAG GGGGTCCGCT CGAACTCAAT CATCTTCATT
CACGGACTGC GCAACGCCAT GCTGCCGGTG ATCACAGTCA TCGGCGACCA GGCGGCCGCC
ATCTTGAACG GTGCCGTCGT CGTCGAGACG GTGTTTGGCT TTCCTGGAAT CGGCAAGCTA
ATGATCGATT CCATCCTGCT TCGCGATTTC GCCGTCGTGT TGGCCGTCAT CATGGTCTCG
GCACTGGCGA TCTTCATCAT GAACCTGTTG ATCGACATCG CCTATGCGCT GCTCGATCCG
CGCATCCGGT ATTGA
 
Protein sequence
MKSFIGKRAI ASGVSLVVLI VIVFFLSRLT GDPTDLYLPI DATTEMRQQF REMNGFNDPL 
IIQFGRYVSD LAQGNFGQSL RQARPAMDVV LEAFVWTFWL AAITMVLVTI AAIVIGSLAA
FRVGGVFDRL ATFFSLIGAA APDFWLAIVA IVIFAVKLHV LPTSGTGTFW HWVLPVSVLF
IRPFGLILQV VRGSMISVLS SAYVKTARAK GVRSNSIIFI HGLRNAMLPV ITVIGDQAAA
ILNGAVVVET VFGFPGIGKL MIDSILLRDF AVVLAVIMVS ALAIFIMNLL IDIAYALLDP
RIRY