Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5354 |
Symbol | |
ID | 8007312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | - |
Start bp | 765060 |
End bp | 765974 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644822258 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002973518 |
Protein GI | 241113683 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.440678 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGTT TCATCGGCAA ACGCGCGATC GCCAGTGGCG TATCGCTCGT GGTGCTTATC GTCATCGTGT TCTTCCTGTC CCGGCTGACG GGCGATCCGA CCGACCTCTA TCTGCCGATC GATGCGACCA CCGAAATGCG CCAGCAATTC CGTGAGATGA ACGGTTTCAA CGATCCGTTG ATCATCCAGT TCGGCCGTTA TGTCTCGGAT CTTGCCCAGG GCAATTTCGG TCAGTCACTG CGGCAGGCCC GTCCGGCCAT GGATGTCGTG CTGGAGGCCT TCGTCTGGAC CTTCTGGCTG GCTGCCATCA CCATGGTGCT GGTCACGATC GCCGCGATCG TCATCGGTTC GCTTGCGGCG TTTCGCGTCG GCGGCGTCTT CGACCGTCTC GCCACCTTCT TCTCGCTGAT CGGCGCTGCG GCGCCGGATT TCTGGCTGGC CATCGTGGCA ATCGTCATTT TCGCCGTTAA ACTGCATGTC CTGCCGACAT CGGGAACGGG AACTTTCTGG CACTGGGTCC TGCCGGTCAG CGTGCTGTTC ATCCGGCCTT TCGGCCTGAT CCTGCAGGTG GTCCGAGGCT CGATGATCAG TGTTCTGTCT TCCGCCTATG TGAAGACGGC CCGCGCCAAG GGGGTCCGCT CGAACTCAAT CATCTTCATT CACGGACTGC GCAACGCCAT GCTGCCGGTG ATCACAGTCA TCGGCGACCA GGCGGCCGCC ATCTTGAACG GTGCCGTCGT CGTCGAGACG GTGTTTGGCT TTCCTGGAAT CGGCAAGCTA ATGATCGATT CCATCCTGCT TCGCGATTTC GCCGTCGTGT TGGCCGTCAT CATGGTCTCG GCACTGGCGA TCTTCATCAT GAACCTGTTG ATCGACATCG CCTATGCGCT GCTCGATCCG CGCATCCGGT ATTGA
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Protein sequence | MKSFIGKRAI ASGVSLVVLI VIVFFLSRLT GDPTDLYLPI DATTEMRQQF REMNGFNDPL IIQFGRYVSD LAQGNFGQSL RQARPAMDVV LEAFVWTFWL AAITMVLVTI AAIVIGSLAA FRVGGVFDRL ATFFSLIGAA APDFWLAIVA IVIFAVKLHV LPTSGTGTFW HWVLPVSVLF IRPFGLILQV VRGSMISVLS SAYVKTARAK GVRSNSIIFI HGLRNAMLPV ITVIGDQAAA ILNGAVVVET VFGFPGIGKL MIDSILLRDF AVVLAVIMVS ALAIFIMNLL IDIAYALLDP RIRY
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