Gene Rleg_5353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5353 
Symbol 
ID8007311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp764130 
End bp765050 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content61% 
IMG OID644822257 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002973517 
Protein GI241113682 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.635306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA CACAAATCCT CGCCGAGAAA AAACCAAGCG GCCCGATCGG GCGCTGGCTG 
ACGATGCTGT GGGCGGACAA GCTCGCTTTC TTCGCGGCTC TGTTCCTCTT GATCGTTCTG
CTCTGTGCGC TGTTTGGCCC GCTCCTGCTG GAAGCCATCG CCACCAAGCA GAACCTGCGG
GGCCGCAACG CGCCGCCGTT CGATATCACC CGCGGAATGC TTTATGTCCT CGGCGCCGAT
GCGCTGGGCA GGCCGCTTCT TGCCCGCGTT ATCGTGGCGG CGCAAAACAC CATCCTGGTT
GCCGCGGCAG CCGTGCTTGC ATCATCCGTC GTCGGGACGG CGCTCGGTCT GGTCGCAGGT
TACAGCCGCT CCTCCGCGGC TCAATGGATC ATGCGCCTCG GCGACGTCAT CATGTCCTTT
CCGTCGCTGC TTCTGGCGGT GATCGTGCTC TACATGCTCG AGCCCTCGGT CACCAATATC
GTCCTCGTCC TGGCGATCAC CCGCATTCCC ATCTATCTGC GCACCACGCG CGCCGAAGTG
CTGGAAGTGC GCGAGCGGAT GTTCGTGCAG GCGGCGAAGG TGATGGGAGC ATCGTATTGG
CGGATTGTCT TCCATCACAT CCTGCCGGTG ATCTTCCCCA CGCTGGTGAC CATCGCGACG
CTCGATTTCG CCTTCGTCAT GCTGGCGGAA TCCTCCCTGT CGTTCCTTGG GATCGGCATT
CAGGCGCCGG AGATCACCTG GGGTCTCATG GTTGCTCAAG GACGACCCTA TCTCACCAAT
GCCTGGTGGC TTTCCTTCTG GCCGGGCCTT GCAATCATTC TGACGACGCT GTCGCTGAAC
CTTCTGTCGA ATTGGCTGCG CATCGCGCTC GATCCGACAC AACGCTGGCG CCTTGAAATG
AGGGGCAGGA AAAATGGCTG A
 
Protein sequence
MADTQILAEK KPSGPIGRWL TMLWADKLAF FAALFLLIVL LCALFGPLLL EAIATKQNLR 
GRNAPPFDIT RGMLYVLGAD ALGRPLLARV IVAAQNTILV AAAAVLASSV VGTALGLVAG
YSRSSAAQWI MRLGDVIMSF PSLLLAVIVL YMLEPSVTNI VLVLAITRIP IYLRTTRAEV
LEVRERMFVQ AAKVMGASYW RIVFHHILPV IFPTLVTIAT LDFAFVMLAE SSLSFLGIGI
QAPEITWGLM VAQGRPYLTN AWWLSFWPGL AIILTTLSLN LLSNWLRIAL DPTQRWRLEM
RGRKNG