Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5338 |
Symbol | |
ID | 8007296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | - |
Start bp | 743730 |
End bp | 744797 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644822242 |
Product | ABC transporter related |
Protein accession | YP_002973502 |
Protein GI | 241113667 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.708738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0411085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGCG TTCAATTCGC GGATGTGCGG AAATCATTCG GGACATTTCC GGTCATCAAA GGCGTGGATA TCGACATTGC CGACGGGGAG TTCGTGATCC TGGTCGGCCC GTCGGGTTGT GGAAAATCCA CTCTTCTGCG GATGCTGGCG GGACTTGAGA ATATTTCCGG CGGCGAGATC AAGATCGGCG GGCGCGTGGT CAACACGCTG CCGCCCAAGG ACCGTGACAT CGCCATGGTG TTCCAGAACT ATGCGCTCTA TCCGCATATG ACGGTACAGG AGAACATGGG TTTCTCGCTG ATGCTGAACA AGGCACCGAA GGCGGAAGCC GAGAAGCGGG TGAAATATGC CGCCGGCATC CTCGGTCTCG ACAAATTGCT CGACCGTTAT CCGCGCCAGC TTTCCGGCGG TCAGCGCCAG CGTGTCGCCA TGGGGCGGGC GATCGTCCGC GATCCGGAAG TCTTTCTGTT CGACGAACCG CTATCCAACC TCGATGCGAA GCTGCGCGTC GCCATGCGCG CCGAAATCAA GGAACTGCAC CAGCGGCTGA AAACGACGAC GGTCTATGTC ACCCACGACC AGATCGAGGC CATGACCATG GCCGACAAGA TCGTCGTCAT GCATGACGGC GTCGTCGAGC AGATCGGCAC ACCGCTCGAG CTCTACGACA AGCCGGCCAA TCTCTTCGTT GGCGGGTTTA TCGGCTCGCC GGCGATGAAC ATGATCAAGG GCAGGCTCGA ACCCGAAAAC CCGACAAGTT TCAGGGCATC CGACGGCACT GCGCTCCCGG TCGCCAATCC GCCAGCCGAC GCCATCGGCC GCGACCTCGT CTACGGGCTG CGCCCGGAAT ACATTTTACT CGATGCCAAC GGGTTGCCCG GCGAAATCGT GGTGATCGAG CCGACCGGCT ACGAGACGCA TCTTATCCTC AGGCTCGGCG GCAGCGACCT CAGCTGCGTC TTCCGCGAAC GCGTCAGCGC GCGGCCGGGC GAAACCCTGC GCGTTTCTAT CGACGCCGCG CATGTTCATC TCTTCGACAC CGAAACCGGG CGGAGATTGA CAGACTGA
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Protein sequence | MAGVQFADVR KSFGTFPVIK GVDIDIADGE FVILVGPSGC GKSTLLRMLA GLENISGGEI KIGGRVVNTL PPKDRDIAMV FQNYALYPHM TVQENMGFSL MLNKAPKAEA EKRVKYAAGI LGLDKLLDRY PRQLSGGQRQ RVAMGRAIVR DPEVFLFDEP LSNLDAKLRV AMRAEIKELH QRLKTTTVYV THDQIEAMTM ADKIVVMHDG VVEQIGTPLE LYDKPANLFV GGFIGSPAMN MIKGRLEPEN PTSFRASDGT ALPVANPPAD AIGRDLVYGL RPEYILLDAN GLPGEIVVIE PTGYETHLIL RLGGSDLSCV FRERVSARPG ETLRVSIDAA HVHLFDTETG RRLTD
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