Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5331 |
Symbol | |
ID | 8007399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | + |
Start bp | 738176 |
End bp | 739216 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644822236 |
Product | DNA polymerase LigD, ligase domain protein |
Protein accession | YP_002973496 |
Protein GI | 241113661 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | [TIGR02776] DNA ligase D [TIGR02779] DNA polymerase LigD, ligase domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.51032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCGCA CGCGCCGCCC ACTGCCCTTG CTCGACGAGT CTCACTCAAC GCTGCATTCT CGTCCGATCC GCAAACGCGA TCCTGACCAG CCCGGCCTGC CCTTCGATCC AATGCCGTCG CGCGTCGAGC CCTGCCTCGC GCTGCTGAAG CCGACTGTGC CCATTGGGCC GGATTGGCTC TATGAGGTGA AGCTGGATGG CTATCGATTG GCAATCCACG TTGAACCGAA GGGCGTGCGG GTCATCACCC GTGGCGGCCA TGACTGGACC CATCGCTTCC CCACCATCGC CGCGGCAGCG AAAGAGCTTG GCGTAACGAC CGCCATTCTC GATGGCGAGG CCGTTGTACT CGATGATAAC GGCCGATCGG ATTTTGGCGC CCTGCAGCGT TCGCTCGGCG GGCGGGGAGG CAAGCGAGTA TCGACCGAGT CGGTCCTCGT CGCCTTCGAC CTTCTCTATC TCGATGGACA CGATCTGACC GGCACCGAGC TTGACGTACG CCGACACCTG CTCGAAGACC TGATACCGGG CGGCGACGAT CAGACGATCC GCCTCTCCGA GCAGATAGAG CTGCCGGCCG AAGAACTCCT CGAGCACGCC TGCCATCATC ATCTGGAAGG TATCATCGCC AAGCATCGCG ACCGGCCCTA CGGCAGTGGC CGTACGGGCG ACTGGCTGAA GATCAAATGC GTCCAGAGCG AGAGCTTCAT GATCGTCGGT TATGAGCAGT CCGCATCCGC CCGCGGCGGC ATCGGCAGGC TATTGCTGGC CGGCAGACGA GGGCTCGACT GGATTTACGT TGGCTCCGTC GGAACTGGTT TCGGTGCCAG GGATGCTGAA TACCTGAAAA AGACGCTGGA CCGGTTAAAG ACGAACCGGC CGGTCGTTCC GCTGAATGGC AAGCGCCTCG TCCTCGTCCA GCCGACGCTG ATCGCTGAGA TCGAGTTTCG CGGCTGGACG GATGACGGCA ATCTCCGCCA TGCTTCGTAC AAGGGGCTGC GCGAGGTCCA GGATAATGCC GCAGTCTTCG ATATGACCTA A
|
Protein sequence | MKRTRRPLPL LDESHSTLHS RPIRKRDPDQ PGLPFDPMPS RVEPCLALLK PTVPIGPDWL YEVKLDGYRL AIHVEPKGVR VITRGGHDWT HRFPTIAAAA KELGVTTAIL DGEAVVLDDN GRSDFGALQR SLGGRGGKRV STESVLVAFD LLYLDGHDLT GTELDVRRHL LEDLIPGGDD QTIRLSEQIE LPAEELLEHA CHHHLEGIIA KHRDRPYGSG RTGDWLKIKC VQSESFMIVG YEQSASARGG IGRLLLAGRR GLDWIYVGSV GTGFGARDAE YLKKTLDRLK TNRPVVPLNG KRLVLVQPTL IAEIEFRGWT DDGNLRHASY KGLREVQDNA AVFDMT
|
| |