Gene Rleg_5327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5327 
Symbol 
ID8007287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp735813 
End bp736589 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content61% 
IMG OID644822233 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_002973493 
Protein GI241113658 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.607169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGGG AAGAGCGGCA CCAGTTGATC GTCAACCTGC TCGTCGAAAA CAAGACCGTC 
GATCTCGACG ACCTTGCTGA TCGCTTCACT GTGTCAAAGA TGACGATCCA TCGCGATCTC
GACGATCTCG AGAAGGCCGG CGTCCTGCGC AAGGTTCGCG GCGGCGCGAC CATTGACGCC
GGAACGCAGT TCGAAAGCGA CTTCCGCATT CGCGAACGCC AGGGTAACGA AGCCAAGCTG
GCTATGGCTC AGACCGCGCT GGAACTGGTC GAACCGGGGA TGACGGTGAT GGTAAATGAC
GGCTCGATGG CGGCCGTGCT CGGCGAAATG CTGCTGCAGA AGCGGCCGCT GACCTTGATC
ACCAACAACG CGGCGATCAT GGAGCGGTTG AAAGGCGAAG CCGGCATCGC GCTGATCGCG
CTCGGCGGTA TCTATTCGGC GAAATTCAAC GCCTATCTCG GCGTCGTCAC CGAGGAGGCA
CTGTCGCGGC TGAGGGCCGA CATCGCCTTC ATTTCAACGC CCGCCGTCAG CGGCGGGCGC
GCCTATCACA TGGACGATAA CGTCGTGCGC GCCAAACGGG CGATGATCGC GTCGTCGACC
AGGACCTGCC TTCTGGTCAA CCATCAGCGC ATCGGCCACA CTGCCCTGCA TGTCATGGCG
GACCTGGCCG ACTTCGACGC GATTATTACC GACAGCGCAC CGGATGCTGC TGTCCTGGAA
GAATTCGAGC AGGCGGGCAT TACGCTCACC ATCGCATCAA CGCAGGATCC GACATGA
 
Protein sequence
MRREERHQLI VNLLVENKTV DLDDLADRFT VSKMTIHRDL DDLEKAGVLR KVRGGATIDA 
GTQFESDFRI RERQGNEAKL AMAQTALELV EPGMTVMVND GSMAAVLGEM LLQKRPLTLI
TNNAAIMERL KGEAGIALIA LGGIYSAKFN AYLGVVTEEA LSRLRADIAF ISTPAVSGGR
AYHMDDNVVR AKRAMIASST RTCLLVNHQR IGHTALHVMA DLADFDAIIT DSAPDAAVLE
EFEQAGITLT IASTQDPT