Gene Rleg_5313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5313 
Symbol 
ID8006950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp717873 
End bp718859 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content64% 
IMG OID644822219 
Productinner-membrane translocator 
Protein accessionYP_002973479 
Protein GI241113644 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGC TCGCCGCCCG CTTCAACGCC GTCTTCGGGG CCGACATGGC CGGCCCCCTC 
GCCGCGCTGG CGGCGGTGCT TGTCGTCTTC GGCTTCGCCT CGCCGCATTT CCTGACGGGC
GCGACCTTCG GATCGGTCGC CTTTCAGCTT CCCGAGCTTG GCGTCCTGAC GCTCGCCATG
CTGATGCCGA TCCTCACCGG TGGCCTCAAC CTTGCGATCA CCTTCACCGC CAACATCGCC
GGCCTGACGC TCGCCTGGAC GCTGCAGGCC AATGGCGGCA TCGATGCAGG CCCGGGCGCC
TTTCTGCTCG GTTCGGCTCT GGCACTCGCC ATCGGCGCGG CAAGCGGCCT GGTCATGGGC
CTCGTCATCG CCTTTACCCG TGCCCATCCG ATCCTCGTTT CGCTGTCGAT GATGATCTTC
CTGCGCGGCC TCGGCGAGTT TCTGACGCGC GGCGGCGATA TCTCGGGCTT TCCCACCTTC
GTCGCTCCGA TCGGCCACGG CAGCATCCTC GGCATCCCCG TCCCGTTGTT GATCCTGATC
GCCTGTGTGA TCGCCAGCCA CATCCTGCTC TCGCGCTCCA AGCTCGGCTT TTCCACCTAT
ATGATCGGCT CCAATATCGA GTCTGCCCGC TATTCTGGCA TCAACACCCG CAAGGTCCTG
GTGCTGGTCT ATATGCTTTC CGGCGTGATG GCTGCGGTTG CCGGCATTAT TATGCTTGCG
CGCTTCAATT CGGTGCGCGT CGGCCACGGC GAGTCCTATC TGCTGATCAC CGTGCTCGCC
TGCTTTCTCG GCGGCATCAA TCCCTTCGGC GGCTTCGGCC GCGTCCTGCC CGTCTTCGTG
GCGCTCATCG TGCTGCAGCT CCTCTCTTCG GGGCTCAACC TGCTCGGCGC CAACCAGCAT
CTCACCACTG CCGTTTGGGG CATCCTGCTC ATCGTCGTGA TGGTGCTGCG CTGGCTCTCG
GCCAAGTTCA TCAAAATCGT CAAATAG
 
Protein sequence
MDALAARFNA VFGADMAGPL AALAAVLVVF GFASPHFLTG ATFGSVAFQL PELGVLTLAM 
LMPILTGGLN LAITFTANIA GLTLAWTLQA NGGIDAGPGA FLLGSALALA IGAASGLVMG
LVIAFTRAHP ILVSLSMMIF LRGLGEFLTR GGDISGFPTF VAPIGHGSIL GIPVPLLILI
ACVIASHILL SRSKLGFSTY MIGSNIESAR YSGINTRKVL VLVYMLSGVM AAVAGIIMLA
RFNSVRVGHG ESYLLITVLA CFLGGINPFG GFGRVLPVFV ALIVLQLLSS GLNLLGANQH
LTTAVWGILL IVVMVLRWLS AKFIKIVK