Gene Rleg_5307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5307 
Symbol 
ID8006944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp711302 
End bp712843 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content64% 
IMG OID644822213 
Productsodium/hydrogen exchanger 
Protein accessionYP_002973473 
Protein GI241113638 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.688031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTCT TCGAAACACT CGTTGCATTG CTGGCGGTTG CCATCCTGCT GCTGCAGGTG 
ACGCGTCGCA TGCGCCTGCC CTACCCCGGC ATCCTGGCTG CCGCCGGCGT CGCCGTGGCG
ATGTTACCCG GCGCGCCGAC GATCCCGATC GATCCGCCGA CGGCGCTCGC TTTGTTCATC
GCGCCCGTTC TTGTCGATTC GGCCTATGAC TTCCCGGTGG GCGCGGCGCG GCGCATGCTG
CTGCCGTTGT TCTTCTACGC TGTTGTTGCG GTTCTCGTCA CGACAGGCGT GGTCGTGTCG
ATCAGCATGC TGACGGTCGG GCTTCCGATT GCGGTTGCGG TTACACTCGG CGCAATTGTT
TCGCCGCCCG ATGCCGCCGC CGCCACGGCA GTCCTTTCCA ATTTGCCGGT CGCCCGCCGC
GTGGATGCTT TGCTCAAGGG AGAAAGCCTG TTCAACGACG CGACTGCGCT GCTGCTTTTC
GGCGCCGCGC TGACTGTCCA GGCGCGTGGC GGGCTGGATG CCGGGACGGC GCTTCAGGTG
GGGTTTGCCG CACCTGGAGG GATCCTGTTC GGCATCGTCT TCGGCTTTTT TGTCTCGCGG
CTTCGGCCGA TAACCGAAAA CACGGTCGGC GGGACCCTGC TTCAATTCGT CTACGCTTTT
TCGACCTGGC TGATCGCCGA ACATCTGCAC CTGTCGGCTG TCCTTGCCAC CGTGGCGAGC
GCAATGACGC TTGCCACTCT CTCTTCGGTC AAGGATTCGC CACGGATGCG GGTGCATTCC
TTCGCCGTCT GGACGACTGT CGTCTTCCTG TTGAACGTGG TGGCTTTCCT GCTGATGGGC
CTGCAGGCGC GCCGCATCCT TGAGGCGATG TCGGCCGAAG AGCTTCAGCG GGCGATGGGA
TTTGCCGCCA TCGTAGTGGT GGGCGTCATC CTGGCGCGCA TGGCAATGGC GTTCCTGCTT
CACGCCGTCG TCGCGTCTCG CCACCGGCGC GGCGGTGAAC TGGCACCTTT CACATCCGGG
GAGACCTTGC TGGTGGGTTG GGCCGGTATG CGCGGCCTCG TTACGCTGGC AACGGCATTC
GCACTCCCCG CCGACTTTCC GGAACGAGAC CTGGTCGGAC TCACGGCCTT CGCGGTGGTG
CTCGCAACGC TGGTCATTCA GGGGGCGACC CTGGCGCCGA TGATCCATCT CCTGAAACTC
GGTCGGCAGG CAGAAGTCCA CGATGAACTC AAGGCGGCCC GAAGGTCGCT CGCCGAAGCG
GCCTTTCAGC GCCTTGAGAA GGAAGACGGC ACTGAGGCCG AAGCGATCCG GACGATCTGC
AAGGATCATT GGACGGCATC AACCGATGCA AACAAGACCT CGCCGCCCGA TCGCCGCCGC
GACCTGACGA TCGCCGCCGT TCTCGCCCAG CGCCAACGCC TTGAGGAATT GCGCGACACA
GATCAGATCG GCGCGACGCA ATATCTCGAG TTGCAGGAGG ACCTGGACTG GAAGCAACTC
TCCGTCGGTT CCGATGAGGA TCGCCGCATC ACGGAAAGCT AG
 
Protein sequence
MTFFETLVAL LAVAILLLQV TRRMRLPYPG ILAAAGVAVA MLPGAPTIPI DPPTALALFI 
APVLVDSAYD FPVGAARRML LPLFFYAVVA VLVTTGVVVS ISMLTVGLPI AVAVTLGAIV
SPPDAAAATA VLSNLPVARR VDALLKGESL FNDATALLLF GAALTVQARG GLDAGTALQV
GFAAPGGILF GIVFGFFVSR LRPITENTVG GTLLQFVYAF STWLIAEHLH LSAVLATVAS
AMTLATLSSV KDSPRMRVHS FAVWTTVVFL LNVVAFLLMG LQARRILEAM SAEELQRAMG
FAAIVVVGVI LARMAMAFLL HAVVASRHRR GGELAPFTSG ETLLVGWAGM RGLVTLATAF
ALPADFPERD LVGLTAFAVV LATLVIQGAT LAPMIHLLKL GRQAEVHDEL KAARRSLAEA
AFQRLEKEDG TEAEAIRTIC KDHWTASTDA NKTSPPDRRR DLTIAAVLAQ RQRLEELRDT
DQIGATQYLE LQEDLDWKQL SVGSDEDRRI TES