Gene Rleg_5294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5294 
Symbol 
ID8007466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp701908 
End bp702705 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content60% 
IMG OID644822200 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_002973460 
Protein GI241113625 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.111966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA CTACAAAAAC ATCACCTTTC ACGCTAGCGG TCTGCGCCGA AATGGTGTTT 
CGCTCCCTGC CCCTCCTCGA TCGGTTGAAG CGCATCACCG AACTCGGCTT CCAGGCGGAA
ATCTGGGATT GGACGAAACA CGATATCGAG GCGATCGCAA AGTCTGGTGC CACTTTCTCG
TCGATGACAG GATACGTGAC CGGCACGCTG GCAGATGACG CCGGAGCCGA TGAGCTGCTG
CGCACTGCGC GCCAGTCGAT CCCGATCGCC AAGGAACTCA ATTGCCCGCG CCTCAACTTG
CATGGCACGG GGCTCGACGG ACAGGGCCTG CCCGTCGTCA AGTCCGAGGT CGTCACCGGC
GCCATGTGGC TGAAGGCCGC CGATACGCTA AACCGCATCG CTGATCTCGG CGAGGAGGAA
GGCGTTACCT TCGTCCTCGA AAACCTGAAC GAGGCTGTTG ACCATCCAAA GACGCCGTTT
GCCAAGGCCG CCGACACGCT TGCATTGGTC GCGGCCGTCA ACCGGCCGTC GCTGAAGCTC
AACCTGGATC TCTACCATGC GCAGATCGGT GAAGGGAACT TGATCGAGCT TTGCCGCACC
GCTCTTCCAC ATATCGGTGA AATTCAGGTC GCCGACGTTC CCGGCCGCAA GGAGCCGGGC
ACTGGTGAAA TCAACTATCC GGCGATCGCA CGCGCCCTGA ACGAGATGGG CTACCGGGGC
ACGATCGGCA TGGAAGCCTG GCCATCCGGC GATGACGAAC TTGCTCTTTC CCGCTTCCGC
GACGCGTTTT CCCTTTGA
 
Protein sequence
MKTTTKTSPF TLAVCAEMVF RSLPLLDRLK RITELGFQAE IWDWTKHDIE AIAKSGATFS 
SMTGYVTGTL ADDAGADELL RTARQSIPIA KELNCPRLNL HGTGLDGQGL PVVKSEVVTG
AMWLKAADTL NRIADLGEEE GVTFVLENLN EAVDHPKTPF AKAADTLALV AAVNRPSLKL
NLDLYHAQIG EGNLIELCRT ALPHIGEIQV ADVPGRKEPG TGEINYPAIA RALNEMGYRG
TIGMEAWPSG DDELALSRFR DAFSL