Gene Rleg_5292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5292 
Symbol 
ID8007398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp699962 
End bp701083 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content60% 
IMG OID644822198 
Productinner-membrane translocator 
Protein accessionYP_002973458 
Protein GI241113623 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCCGA TCGAGCAAAA AATAGGAGAT GCGTCAAACT CCGACGAGCG CATCAAACAG 
GTGGGCTTTC TCACACATAT GATGCGTCGG CCCGAGCTCG GCGCGGTTGC TGGCCTCGTC
CTGGTGGTGA CGTTCTTCTT TCTTACCGCA GACCGTTCGA TGTTTTCGCT TTCAGGTGTG
ATGACGATCC TGGCCCCAGC CTCACAGCTG GGAATTCTCG CCATTGCGGC AGCTCTGCTG
ATGATTGGTG GCGAGTTCGA TCTTTCGATC GGCTCGATGG TGGCCTTCGC CGGATTGATC
TTCGGCGCGG CCCTGACCAA TTTCGGTCAA CCGCTCTGGA TTTCCATTAT CATCACGATG
CTGCTTGCAG CCGCCATGGG CGCGGTGAAC GGACAGATTG TGATCAGGAC ACGGCTGCCG
TCGTTCATCG TCACGCTTGC CTTCCTCTTT ATTTTGCGGG GTCTAACCCT TGTTGGCCTG
AAATGGGCGA CAGGCGGCTC AACTCAGCTT CGCGGGATAG GTGAGGTTGT CGGCGACGGT
CCCTTGAAGC GCCTGTTCTC AGGCGTCGCC TTCCAGGATC TTTTCAGCTG GCTTGCAGCC
CATGGCCTGA TCGAGAAGTT CGACAACGGC GTTCCGAAAG TCACGGGCGT GCCGGTGTCC
GTGGTCTGGT TCATCGCCAT TGCCGGGCTC GCCACCTGGG TTCTTCTGCG CACCCGGATC
GGAAACTGGG TTTTTGCCGC CGGCGGCGAT CCCAATGCGG CAAGAAACTC CGGGGTCCCG
GTCGATCGCG TGAAGACGGG GCTCTTCGCG CTCACAGCCT GCGCCGCGGC GCTTGTGGCA
ATTATCACCG TGCTGGATGC CGGCTCGACG GACGCGCGCC GCGGTTTCCA GAAGGAGTTC
GAGGCGATCA TCGCTGCCGT GATTGGCGGA TGTCTGCTGA CCGGCGGTTA TGGATCGGCG
ATCGGCGCCT TCTTCGGCGC CATCATCTTC GGTCTCGTCT CGATCGGCCT GACCTACACG
AAGTTCGACT CGGACTGGTT CCAAGTCTTC CTCGGCTCCA TGCTGCTGCT GGCCGTTCTC
TTCAACAATT TCATTCGCCG CAAAGTGACA GGGGAGCGCT GA
 
Protein sequence
MAPIEQKIGD ASNSDERIKQ VGFLTHMMRR PELGAVAGLV LVVTFFFLTA DRSMFSLSGV 
MTILAPASQL GILAIAAALL MIGGEFDLSI GSMVAFAGLI FGAALTNFGQ PLWISIIITM
LLAAAMGAVN GQIVIRTRLP SFIVTLAFLF ILRGLTLVGL KWATGGSTQL RGIGEVVGDG
PLKRLFSGVA FQDLFSWLAA HGLIEKFDNG VPKVTGVPVS VVWFIAIAGL ATWVLLRTRI
GNWVFAAGGD PNAARNSGVP VDRVKTGLFA LTACAAALVA IITVLDAGST DARRGFQKEF
EAIIAAVIGG CLLTGGYGSA IGAFFGAIIF GLVSIGLTYT KFDSDWFQVF LGSMLLLAVL
FNNFIRRKVT GER