Gene Rleg_5285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5285 
Symbol 
ID8007458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp693609 
End bp694772 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content62% 
IMG OID644822192 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002973452 
Protein GI241113617 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG TAAACGTCTG CGAAGTTACC AAGCCCATCG CGTCGCCCAT CCGCAACGCC 
TATATCGACT TTTCGAAGAT GACGGCCAGT CTCGTTGCCG TCGTGACCGA TGTCGTCAGG
GACGGCCGCC GCGTCGTTGG CTATGGCTTC AACTCGAACG GCCGTTATGG CCAGGGCGGC
CTGATCCGCG AACGGTTCAA GGACCGCATC CTGCAGGCAG ACCCGGACAG CCTGATCAAC
GACGCCGGCA CCAACCTCGA TCCGCACAAG ATCTGGTCGA CCATGATGAT GAATGAAAAG
CCCGGCGGTC ACGGCGAGCG CTCCGTGGCT GTCGGTACCA TCGACATGGC CATCTGGGAT
GCGGTTGCGA AGATCGAAAG TAAACCTCTC TTCCGCATGC TGGCCGACAT GAAGGGCCGC
GAGGCGGACC CCAGGGTCTT CGTTTACGCC GCCGGCGGCT ACTACTATCC CGGCAAGGAC
AACAGTGCGC TTCGCAAGGA GATGCGCGGC TATCTCGACC GCGGGTACAA TGTCGTGAAG
ATGAAGATCG GTGGCGCCTC GATCGACGAG GACCGAGGCC GCATCGAATC CGTGCTGGAA
GAGATCGGTT CCGAGGCGAA ACTCGCGGTC GATGCGAACG GCCGCTTCGA TTTGGAGACC
GGCATCGCCT ACGCCAAGAT GCTGCGTGAC TACCCGCTTT TCTGGTACGA GGAAATCGGC
GATCCGCTCG ACTACGCCTT GCAGGCGGCC ATCTCCGAAT TCTACGACGC TCCGATGGCA
ACCGGCGAGA ACCTCTTCTC CCACCAGGAT GCCCGCAACC TGCTTCGTTA CGGCGGCATG
CGCGCCGACC GCGACTTCCT GCAGTTCGAC TGCGCCCTGT CCTACGGTCT CGTCGAATAC
CTCCGGACCC TCGACGTCCT GCGCCAGTTC GGTTGGTCGC CGTCCCGCTG CATCCCGCAT
GGCGGTCACC AGATGTCGCT CAACATCGCG GCCGGCCTCG GCCTCGGTGG CAATGAGAGC
TATCCGGATC TCTTCCAGCC TTTCGGGGGC TTCCCGGACG GCGTAAAGGT CATCGACGGG
CACATCACGA TGCCTGAGCT GCCGGGCATC GGCTTCGAAG GCAAGTCTGA CCTTATCAAG
GTCATGCGAG AGCTCGCCGA ATAG
 
Protein sequence
MRIVNVCEVT KPIASPIRNA YIDFSKMTAS LVAVVTDVVR DGRRVVGYGF NSNGRYGQGG 
LIRERFKDRI LQADPDSLIN DAGTNLDPHK IWSTMMMNEK PGGHGERSVA VGTIDMAIWD
AVAKIESKPL FRMLADMKGR EADPRVFVYA AGGYYYPGKD NSALRKEMRG YLDRGYNVVK
MKIGGASIDE DRGRIESVLE EIGSEAKLAV DANGRFDLET GIAYAKMLRD YPLFWYEEIG
DPLDYALQAA ISEFYDAPMA TGENLFSHQD ARNLLRYGGM RADRDFLQFD CALSYGLVEY
LRTLDVLRQF GWSPSRCIPH GGHQMSLNIA AGLGLGGNES YPDLFQPFGG FPDGVKVIDG
HITMPELPGI GFEGKSDLIK VMRELAE