| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5267 |
|---|
| Symbol | |
|---|
| ID | 8007440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 678974 |
|---|
| End bp | 679633 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644822174 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002973434 |
|---|
| Protein GI | 241113599 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.316086 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGT TCACACTCTG GGACATCCTG CGCAACCTGC TGCTCGCCAC CCGCTGGACG
ATCCTGCTTT CGCTGGTCTC GTTCATCGGC GGCGGCGTGG TCGGGCTGGG GCTGCTGTTC
CTGCGTATCA GCAAGCGCAA GGCATTCAGG ACAGTCGCGA AATATTATAT CGAGCTCTTC
CAGGGCACGC CGTTGCTGAT GCAGCTCTTC ATCGCCTTTT TCGGTCTCGG CCTCTTCGGG
ATAGACGTGC CGGCCTGGCT TGCTGCGGGT TTCGCGCTGA TCTTGTGGAG CGCTGCCTTC
CTCGCCGAAA TCTGGCGAGG CTGCGTCGAA GCGGTCGTGA AGGGTCAGTG GGAAGCCTCC
GCCAGCCTCG GCATGGGCCG GTTGCAGCAG ATGCGTTATG TCATCCTCCC GCAGGCGCTG
AGGGTCGCCA TACCGCCGAC GGTCGGTTTC TCCGTTCAAA TCGTCAAGGG AACGGCGCTG
ACCTCGATCA TCGGTTTCGT CGAATTGTCG AAAGCCGGCA CGGTCGTCAC CAATGCCACT
TTCCAGCCCT TCACCGTCTA CGGGCTCGTC GCTCTCATCT ACTTCGCCCT TTGCTGGCCT
TTGTCAAAAA GCAGCCAGAT CCTGGAAAGG AAGCTCAATG TCGCTCATCG AAATCACTGA
|
|---|
| Protein sequence | MIEFTLWDIL RNLLLATRWT ILLSLVSFIG GGVVGLGLLF LRISKRKAFR TVAKYYIELF
QGTPLLMQLF IAFFGLGLFG IDVPAWLAAG FALILWSAAF LAEIWRGCVE AVVKGQWEAS
ASLGMGRLQQ MRYVILPQAL RVAIPPTVGF SVQIVKGTAL TSIIGFVELS KAGTVVTNAT
FQPFTVYGLV ALIYFALCWP LSKSSQILER KLNVAHRNH
|
|---|
| |