Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5266 |
Symbol | |
ID | 8007439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | + |
Start bp | 678306 |
End bp | 678977 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644822173 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002973433 |
Protein GI | 241113598 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTTACC ATTTCGAATT CGGCTGGCTG CTTGAATATT ATCCTGAGAT CATCAAGGGC ATACTGATCA CGCTGGAGCT TATCGCCATC GGCGGAGTGC TCGGCATATC GCTCGGCATC TTCTGTGCCT GGGCGCGTGC ACTCGGCCCG GCCTGGCTGA AGCCTGTCGT TGCGACCTAT GTCGAACTGA TCCGCAACAC GCCGTTCCTG ATCCAGCTCT TTTTCATCTT CTTCGGCCTT CCGTCGCTCG GCTTCAAGCT TTCCGAACTG ACGGCCGCCA ACCTCGCGAT GGTCGTCAAC CTCGGCGCCT ATAGCTGCGA AATTATCCGC GCGGGCATCC AGGCAACCCC GAAGGGCCAG TTCGAGGCAG GCGAGAGCCT TGCCATGACG CGCTTCGAAA CCTTCCGGCA TGTCGTTCTC GTGCCATCCC TGCAGCGCAT CTGGCCGGCA CTGTCGTCGC AAGTGGTCAT CGTCATGCTC GGCTCATCAG TCGTCTCGCA GATCGCCGCC GAGGATCTGA CCTTTGCCGC GAACTTCATA CAATCGCGAA CCTTCCGCGC CTTCGAGGCC TACATCGTCT CGACAGCCAT CTATCTTGTG CTGGCGATCC TGCTTCGGCA GCTGCTGGCG GTGGTCGGCG GGTTCATTTT CCCGAGGAGA GCAGCACGAT GA
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Protein sequence | MSYHFEFGWL LEYYPEIIKG ILITLELIAI GGVLGISLGI FCAWARALGP AWLKPVVATY VELIRNTPFL IQLFFIFFGL PSLGFKLSEL TAANLAMVVN LGAYSCEIIR AGIQATPKGQ FEAGESLAMT RFETFRHVVL VPSLQRIWPA LSSQVVIVML GSSVVSQIAA EDLTFAANFI QSRTFRAFEA YIVSTAIYLV LAILLRQLLA VVGGFIFPRR AAR
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