Gene Rleg_5266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5266 
Symbol 
ID8007439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp678306 
End bp678977 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content59% 
IMG OID644822173 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_002973433 
Protein GI241113598 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTTACC ATTTCGAATT CGGCTGGCTG CTTGAATATT ATCCTGAGAT CATCAAGGGC 
ATACTGATCA CGCTGGAGCT TATCGCCATC GGCGGAGTGC TCGGCATATC GCTCGGCATC
TTCTGTGCCT GGGCGCGTGC ACTCGGCCCG GCCTGGCTGA AGCCTGTCGT TGCGACCTAT
GTCGAACTGA TCCGCAACAC GCCGTTCCTG ATCCAGCTCT TTTTCATCTT CTTCGGCCTT
CCGTCGCTCG GCTTCAAGCT TTCCGAACTG ACGGCCGCCA ACCTCGCGAT GGTCGTCAAC
CTCGGCGCCT ATAGCTGCGA AATTATCCGC GCGGGCATCC AGGCAACCCC GAAGGGCCAG
TTCGAGGCAG GCGAGAGCCT TGCCATGACG CGCTTCGAAA CCTTCCGGCA TGTCGTTCTC
GTGCCATCCC TGCAGCGCAT CTGGCCGGCA CTGTCGTCGC AAGTGGTCAT CGTCATGCTC
GGCTCATCAG TCGTCTCGCA GATCGCCGCC GAGGATCTGA CCTTTGCCGC GAACTTCATA
CAATCGCGAA CCTTCCGCGC CTTCGAGGCC TACATCGTCT CGACAGCCAT CTATCTTGTG
CTGGCGATCC TGCTTCGGCA GCTGCTGGCG GTGGTCGGCG GGTTCATTTT CCCGAGGAGA
GCAGCACGAT GA
 
Protein sequence
MSYHFEFGWL LEYYPEIIKG ILITLELIAI GGVLGISLGI FCAWARALGP AWLKPVVATY 
VELIRNTPFL IQLFFIFFGL PSLGFKLSEL TAANLAMVVN LGAYSCEIIR AGIQATPKGQ
FEAGESLAMT RFETFRHVVL VPSLQRIWPA LSSQVVIVML GSSVVSQIAA EDLTFAANFI
QSRTFRAFEA YIVSTAIYLV LAILLRQLLA VVGGFIFPRR AAR