| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5260 |
|---|
| Symbol | |
|---|
| ID | 8007434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 674258 |
|---|
| End bp | 674917 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644822168 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002973428 |
|---|
| Protein GI | 241113593 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.571687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCACA CTTTTCTCGA ACAACTCTGG ATCGCCCGAT ACGTCATCAT GAACGGCATC
GGCGTGACCG TGTCGATCTC CCTGCTGGCC ATCCTTGCGG GTTCCATACT TGGCGTTTTC
GTCGGTTTGG CGCTCGTCTA TGGCGGCGTT GTTTTGCGGC TGGCCGTGCG TGCCTATACG
GATATCATCC GTGGCACGCC GGTGCTCGTA CTGGTGCTGG CGAGCTACTA CGTCTCCGCC
GCCGTCGGCC TCGATCTCGG GCCGTTCTCG GCCGGGGTGC TCGCCCTTGC CGTCTTCTGC
TCCTCCCATG TCGGCGAAAT CGTGCGCGGA GCGCTTCAGG CAATCCCGAA GGGCCAGACC
GAAGCCGCCA AGGCGATCGG CCTGACCTTT ACCCAGACTT TCACCTCTGT GCTGTGGCCG
CAGGCCATGC GCCAATGCCT GCCGGCCTGG GTGAATACGG CGGCCGAGAT GGTGAAAGCC
TCGACGCTGC TCTCCGTCAT CGGCGTTGCG GAGCTTCTCC TACGCACGCA GGAGATCATC
TCCCGCAATT TCATGAGCCT CCAGTTCTAC TTCCTGGCCG GTGGTCTCTA TTTCATCATC
AACTACGGCA TCGAGCACTT CGGCAAATAT GTCGAGCGCA AGACCGCCCT GCCGTCCTGA
|
|---|
| Protein sequence | MSHTFLEQLW IARYVIMNGI GVTVSISLLA ILAGSILGVF VGLALVYGGV VLRLAVRAYT
DIIRGTPVLV LVLASYYVSA AVGLDLGPFS AGVLALAVFC SSHVGEIVRG ALQAIPKGQT
EAAKAIGLTF TQTFTSVLWP QAMRQCLPAW VNTAAEMVKA STLLSVIGVA ELLLRTQEII
SRNFMSLQFY FLAGGLYFII NYGIEHFGKY VERKTALPS
|
|---|
| |