| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5259 |
|---|
| Symbol | |
|---|
| ID | 8007433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 673590 |
|---|
| End bp | 674252 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644822167 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002973427 |
|---|
| Protein GI | 241113592 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.298032 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTACA CGTTGAATTT CGCTGCCGTC TGGCGCAACT TCGATTATCT TTTGAGCGGG
CTCGCGCTCA GTCTCGGCCT TGCGGTGATC TCGATCCTGA TCGGGGCCGC GATCGGCCTT
GTGGTGGCCT TCGCGCTGAC CTCCAAAAGC CGCTTTGCGG TGGTGCCGGC GCGAGTTTAT
GTCACTGTCA TTCGCAACCT GCCGATTCTC GTCCTGGTGC TTTTCGTCTT TTTCGCGCTG
CCGCAAATGG GTTTGCGCCT CGACAAGATA AAAAGCTTCG TCCTGGTTCT GTCGCTTTAT
TCCGGCGCCT ATCTGGCAGA AGTGTTCCGC GCCGGGCTGC TGTCTATTCC AAGAGGGTTG
ACGGAAGCGG GGCTTGCCAT CGGCCTGACG GGGATGCAGA TCCGCAGCTC CATCATCGCT
CCGCTGATGC TGCGCAACGT GCTGCCATCA CTGTCCTCGA CGATCATCTC GCTCTTCAAG
GACACCTCGC TCGCCGCCGC CATCGCCGTG CCCGAACTGA CGTTTGCTGC CCGCAAGATC
AATGTCGAGA GCTTCCGCGT CATAGAGACC TGGATGGTGA CGTCAGCGCT CTATGTCGCG
GCCTGTTTCC TCATCGCCGC CGTGATGCGC GTCGTCGAGC GCAGTCTGGC CCTGCCGAGA
TAG
|
|---|
| Protein sequence | MGYTLNFAAV WRNFDYLLSG LALSLGLAVI SILIGAAIGL VVAFALTSKS RFAVVPARVY
VTVIRNLPIL VLVLFVFFAL PQMGLRLDKI KSFVLVLSLY SGAYLAEVFR AGLLSIPRGL
TEAGLAIGLT GMQIRSSIIA PLMLRNVLPS LSSTIISLFK DTSLAAAIAV PELTFAARKI
NVESFRVIET WMVTSALYVA ACFLIAAVMR VVERSLALPR
|
|---|
| |