| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5238 |
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| Symbol | |
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| ID | 8007412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012848 |
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| Strand | + |
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| Start bp | 649692 |
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| End bp | 650351 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644822146 |
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| Product | ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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| Protein accession | YP_002973406 |
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| Protein GI | 241113571 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03003] ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.86624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGGG ATTGGGACTT CGTCTGGCAG ATCATGCCGA CCCTTCTCGA AGGGTTCAAG
ATCACTCTTC TCGCGACCAT CCTCGGCGCT GCCGTCGCCA TGATCGTCGG CCTGGGGCTC
GCCATTGCGC GACGCTCACC GGTCGCCGGC ATTTCCAGGA CGGTCGCTTT CGTCTCGGAA
TTCATCCGCG GCACGCCATT GCTGGTGCAG CTCTACTTCA TCTTCTACGT GCTGCCGGAT
ATCGGCATTC GGCTGGCGCC GCTGGTCGCC GGCGTCATCG GCATGGGCAT TCACTATGCG
ACCTATACCG CCGAGGTCTA TCGCGCCGGC ATCGAGAACG TGCCGCGCGG CCAATGGGAG
GCGGCCAAGG CCACCAATTT GACGACGCGC CAGGCCTGGA TCCACGTGAT CCTGCCGCAG
GCGATCCCGC CGATGATCCC GGCGCTCGCC AATTATTTCA TCGCCATGTT CAAGGAAACG
CCGCTGCTTT CGGCGATCAC CGTGCTCGAA CTCATGAACC AGGCAAAGAG CATCGCCAAC
AGCAACTACC GCTACATCGA GCCGATGACG CTGGTCGGTG TCTTCTTCCT CGTCATCAGC
CTGATCTCGG TCGTGGGATT ACGCTGGCTC GAAGAACGCT ACGCCAGGAT GGATGACTGA
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| Protein sequence | MEWDWDFVWQ IMPTLLEGFK ITLLATILGA AVAMIVGLGL AIARRSPVAG ISRTVAFVSE
FIRGTPLLVQ LYFIFYVLPD IGIRLAPLVA GVIGMGIHYA TYTAEVYRAG IENVPRGQWE
AAKATNLTTR QAWIHVILPQ AIPPMIPALA NYFIAMFKET PLLSAITVLE LMNQAKSIAN
SNYRYIEPMT LVGVFFLVIS LISVVGLRWL EERYARMDD
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