| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5237 |
|---|
| Symbol | |
|---|
| ID | 8007411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 649028 |
|---|
| End bp | 649687 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644822145 |
|---|
| Product | ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
|---|
| Protein accession | YP_002973405 |
|---|
| Protein GI | 241113570 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03004] ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.503805 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTAT GGTCCGGCTA TCTGACACTG ATCCTTGAGG GCGCCCTGGT GACGCTCGAA
CTGACGATCA TGGGATCTGC GCTGGCGCTG GTGATGGCCT TCCTGGCGGG CCTCGGCCGG
TTGTCGCGCT TCTTCGCCGT GCGCGCGTTG GCGACGGCCT ATATCGAGTT CTTCCGCGGC
ACCTCGATCT TCGTCCAGCT CTTCTGGGTC TATTTCGTAC TGCCTTTCGC GGGCTTGACC
CTGACGCCGC TGCAGGCGGG CGTGTTGGCG CTCGGGCTGA ATGTCGGCGC CTATGCGGCG
GAAGTGGTGC GCGGCGCCGT CAAGGCCGTC GGGCGCGAAC AGTCGGAAGC CTGCATCGCG
CTCAACCTTT CGCGATACCA GCGCATGCGC CACGTCATCC TGCCGCAGGC GCTGCCGCTG
ATGCTGCCGA CCTTCTGCAA CAATGCGATC GAACTCTTGA AGGGCACGGC CGTCGTGTCG
CTGATCTCGC TGACCGATAT GACGTTCCAG GCGCAGGTAG TGCGGGCCCA AACCGGCAAC
ACGCTGGTGC CCTTCGCGAC GATCCTCATC CTCTATTTTC TCATGGCCTC GGCGATCTCC
GCGACGATGC GCTGGCTGGA GCGACGGATG GCGCGCAGCC TCGACGGCAT AAGGACCTGA
|
|---|
| Protein sequence | MSVWSGYLTL ILEGALVTLE LTIMGSALAL VMAFLAGLGR LSRFFAVRAL ATAYIEFFRG
TSIFVQLFWV YFVLPFAGLT LTPLQAGVLA LGLNVGAYAA EVVRGAVKAV GREQSEACIA
LNLSRYQRMR HVILPQALPL MLPTFCNNAI ELLKGTAVVS LISLTDMTFQ AQVVRAQTGN
TLVPFATILI LYFLMASAIS ATMRWLERRM ARSLDGIRT
|
|---|
| |