| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5218 |
|---|
| Symbol | |
|---|
| ID | 8007113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 629900 |
|---|
| End bp | 630661 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644822127 |
|---|
| Product | transcriptional regulator, DeoR family |
|---|
| Protein accession | YP_002973387 |
|---|
| Protein GI | 241113552 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.439257 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGCAG AACAGAGGCG GCAGCAGATC ATGCTGGAAC TTCAACGGGT TGGCCAGGCA
CGCACCCGCC AGCTCGCGGA ATTCTTCGAG GTCTCGGAAG TGACGATCCG CTCCGATCTC
GAAATCATGG ACGCCAAGAA GCAGCTAATC AAAACGCATG GCGGGGCAAT CGCCCTGCCG
TCCGACTCTC CGGCAGCAGC CTTCGAGGAA CGCATGCAAC GCAATTTCGA TGCGAAGCGA
CGCATCGCCC AGATGGCTGC GAGACAGATC ATCGATAACC AGTCGATCGT CTTCGACAGC
GGCTCGACGC TGCTGCAGGT CGCCATGCAG ATGCCACCAG TCAACAACGT CGTGGTTGCG
ACAACGGCAA TGAACATCGC CCAGCATCTG ATGTACCGGC CAGGGCTCGA CGTGCACATG
ATCGGCGGCC GCGTGTTTCC CAGCACCGTG AGCACGATCG TACAGGACTC CGACAAGGCG
GTCGGCGGCC TCGTCGCCCA CCAGGCTTTT GTCGGCGCCC ACGCGATCGA TCAGGCCTTC
GATGTCGTCG ATGTCTCCGA GGACGTGGCA CGGACCAAGC GCAACCTGGT TCGCATGGCG
CGGCGTGTCG TCCTCGTGGC GGATTCGAGC AAATTTGACG TCGGCGCCTC CTCCAAAGCC
TTCTCGCTGT CGCGCGTCGA CTTGATCATC ACGGACAGCA ACATGCCGCA CAGCATTCGC
CACAGGCTCG ACAAGCTGGG CGTGGAGGTT CGCTACGCGT GA
|
|---|
| Protein sequence | MLAEQRRQQI MLELQRVGQA RTRQLAEFFE VSEVTIRSDL EIMDAKKQLI KTHGGAIALP
SDSPAAAFEE RMQRNFDAKR RIAQMAARQI IDNQSIVFDS GSTLLQVAMQ MPPVNNVVVA
TTAMNIAQHL MYRPGLDVHM IGGRVFPSTV STIVQDSDKA VGGLVAHQAF VGAHAIDQAF
DVVDVSEDVA RTKRNLVRMA RRVVLVADSS KFDVGASSKA FSLSRVDLII TDSNMPHSIR
HRLDKLGVEV RYA
|
|---|
| |