Gene Rleg_5213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5213 
Symbol 
ID8007108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp623753 
End bp625000 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content60% 
IMG OID644822122 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002973382 
Protein GI241113547 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.506772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCA GAAAATTCGG CGTGACGATG CGGGCTGCCG TAGCGGTATG GGCGCTCTGC 
GCCACATCCG CGTTTGCCGA CACCACCATC GAGTTCATTC AATGGTGGGA ACCCGAAATG
CCGTCCGGCG CCTTGCGCGG CATTATGAAC GATTTCGAAG CCAAAAATCC CGGCATCAAG
GTGACGCTTG TCAGCGGTCC CTATGCCACG ACGCGTGACC AGATCGTCGT CGGCGCCGCC
TCGGGAACGC TCAGCGACGT GGTCGGCCTC GATGGTGCCT GGGTAAACGG GCTCGCCAAG
CAGGGCGCGA TCGCCTCCAT GGACGAACTG ATGGAGAAGG CGAAATACGA CAAGAGCCAG
ATCACCGATA TCGTCAAGGT CGATGGCAAG AGCGTGATGT TCCCGCTGGC ATCCTTCGTC
TACCCGGTCT TCGTGAACCT GGATATCTCC AAGGCCGCCG GCGTCGACAA GTTGCCGACC
ACGCGCACGG AATTCGCTGA AGCCGCGAAG AAGATGACCG ACGCCTCGAA GAACCAGTAC
GGCTGGGTTC TGCCGCTATC GCTGCAGTCT CCGAGCGGAA TCCAGAACGA CGTCATGTCC
TGGGTCTGGG CCTCCGGCGC CTCGATGCTG AAGGACGGCA AGCCTGACCT CGAAAATGAC
GCCGTCGTCG GCACGCTCGA TTATCTTGCC TCGCTCAACA AGGAAGGCGT GATTTCTCCC
GGCATCTTCG CCAAGAAGGA ACAGGACAAG GTCGAAGAAT TCGTCAACGG CCGCGTCGGC
ATGATGGTGG ATTCCCTCGC CCATGTGAAC CTCATCCGCG AGCGCAATCC GAAGCTCAAC
TTCGGCATCT CCGCCTTGCC GGCCACTGAC GGCTACACCG GCAAGCGCGG CATGCCCTAT
GCCTCCTGGG GCATCGGCAT CAGCGAAGGC AGCCAGCACA AGGAAGAAGC CTGGAAGCTG
GTCGAATACC TGATGAGCCC TGACGTTAAC GGCCGTCTCG TCTCGATTGC CAATGCCTTC
CCCGGCAACG TCCATGCCAA GCCGGACTTC GTGGCCTCGG ACCCGATTTT CGCGGAAGCT
TTCAAAATCT TCCAGAGCGG CTATCCTGCC AACGAATTCG TCGGTCTTCC GGTTGCCGAA
GAGCTGATGC GCGACATGAA CGTCGAAGTC CAGAAGATGT TCGACGGCGG GCAGTCGGCT
AAGGACGCAG CTGCCAATAC CCAGAAGGCG TGGCTCGCGA AGTTCTAA
 
Protein sequence
MNIRKFGVTM RAAVAVWALC ATSAFADTTI EFIQWWEPEM PSGALRGIMN DFEAKNPGIK 
VTLVSGPYAT TRDQIVVGAA SGTLSDVVGL DGAWVNGLAK QGAIASMDEL MEKAKYDKSQ
ITDIVKVDGK SVMFPLASFV YPVFVNLDIS KAAGVDKLPT TRTEFAEAAK KMTDASKNQY
GWVLPLSLQS PSGIQNDVMS WVWASGASML KDGKPDLEND AVVGTLDYLA SLNKEGVISP
GIFAKKEQDK VEEFVNGRVG MMVDSLAHVN LIRERNPKLN FGISALPATD GYTGKRGMPY
ASWGIGISEG SQHKEEAWKL VEYLMSPDVN GRLVSIANAF PGNVHAKPDF VASDPIFAEA
FKIFQSGYPA NEFVGLPVAE ELMRDMNVEV QKMFDGGQSA KDAAANTQKA WLAKF