Gene Rleg_5205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5205 
Symbol 
ID8007100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp616683 
End bp617567 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content56% 
IMG OID644822114 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002973374 
Protein GI241113539 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.53764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCA AACGGACCGT ATTTCCCAAC AAGCTTTTGC CTTACCTGCT CATCGCACCC 
CAAATTTTCG TGACCGTGGT ATTCTTCCTC TGGCCCGCGG CGACGGCATT CTGGCAATCT
TTCCTGCGCC AGGATGCCTT CGGCTTCAAA ACGAGTTTCG TCTGGTTCGA AAACTACCGC
CGGCTCTTTG CCGATCCGAT CTACATCAAC GCCTTCGGCC ACACGCTCAT CTTCGCCATT
CTCGTGACGG TCCTATCGAC GGCGATCGCG CTGCTCCTGG CTGCAGCGGC GATGCGCGTG
TTGCGCACCT CTCGCATTTA TTCGACCTTG CTGATCTGGC CCTATGCCGT CGCTCCCGCG
ATCGCCGGCA TTCTTTGGTG GTTCATGTTC AATCCCTCGA TCGGCATCGT CGCCTATATG
TTGCGGGCGA TGGGGATCAA CTGGAACCAT CTGATCAATC CTGACGACGC CATGATCCTG
ATCGTCATCG CGGCGACTTG GAAGCAGATT TCCTATAATT TCTTATTCTT CTTGGCTGCG
CTGCAGTCGG TCCCGCGTTC GCTTCAGGAA GCCGGGGCCA TCGACGGAGC CGGTCCTGTG
AAGCGTTTCT GGACGATCGT GTTCCCGCTG ATCTCACCGA CAACCTTCTA TCTGATCGTC
ATCAATATCG TTTACGCGAT GTTCGATACC TTCGGCATCA TTCATGCGAC CACCCAGGGC
GGACCGGCGC GTGCAACCGA GATCCTTGTC TACAAGGTCT ATTTCGACGG CTTCATCGGA
CTGAATTTGG GCTCGTCGGC GGCGCAGTCG GTCATTCTCA TGGTGATCGT CATCGCTCTG
ACCGCCGTCC AATTCCGCTT CATCGAACGC CGCGTGCAAT ATTGA
 
Protein sequence
MQTKRTVFPN KLLPYLLIAP QIFVTVVFFL WPAATAFWQS FLRQDAFGFK TSFVWFENYR 
RLFADPIYIN AFGHTLIFAI LVTVLSTAIA LLLAAAAMRV LRTSRIYSTL LIWPYAVAPA
IAGILWWFMF NPSIGIVAYM LRAMGINWNH LINPDDAMIL IVIAATWKQI SYNFLFFLAA
LQSVPRSLQE AGAIDGAGPV KRFWTIVFPL ISPTTFYLIV INIVYAMFDT FGIIHATTQG
GPARATEILV YKVYFDGFIG LNLGSSAAQS VILMVIVIAL TAVQFRFIER RVQY