Gene Rleg_5194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5194 
Symbol 
ID8007089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp604971 
End bp605972 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content62% 
IMG OID644822103 
Productplasmid partitioning protein RepB 
Protein accessionYP_002973363 
Protein GI241113528 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins
[TIGR03454] plasmid partitioning protein RepB 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0223628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.149754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA AGAACCTCAT CGAAATTTCC GCTCCGAACC CGGCAAGGGC GGACGCGGTC 
GCACTGCGCG ACAATCGTCC GATCGCTGGA TTCGTGCCGC AGGAGCGCAG TGCCGCGCCG
GTCGGCGGCA TTACCAAGAC GCTCGGCAAC ATTACCGAGA AAATGGAGCG GGCGAGTGAG
CTGGAACGGC AGCTTGCCAG TGGCCAGACG ATCATCGAAC TCGATCCCGG CCTGATCGAC
GCTTCCTTCG TCAGCGATCG ATTGGCGATC GATGCGGCCG AACTCGCGCA GCTTGTCGAG
CAGATCCGCG AGCATGGGCA GCAGGTTCCG ATTCTTGTCC GCCCGCATCC CGAAAGCAGG
GGACGCTATC AGGTCGCCTA CGGCCATCGT CGCCTGGCTG CCACCCGAGA AATTGGCATC
AGGGTGCGTG CGGTCGTCCG CGATCTCACC GACGGTCAGC TGGTCGTCAG CCAGGGACAG
GAAAACAGCG CTCGAACCAA TCTCTCCTAC ATCGAGCGCG CACTTTTCGC ATCGCGGCTC
GAGGAACGCA GCTTTGGCCG CGATGTCATC ATGGCGGCCC TCGGCGTGGA CAAGGCGGCG
CTGTCGAGAA TGCTGATCGT CATACGACAG GTCCCCCTGA CGCTCGTCAA TGCCATAGGT
GCAGCACCTG ATATCGGCCG CCGCCGATGG CTGGAACTGG GGGAGCGGCT TGAGAAAGCC
GACGTCGAAA AGATCATCGC GGAGTTGTCC GCGGACGACG CGCGCAAAAT TTCGAGCGAC
GAGCGGTTTC ACCGGGCGCT CGTTCTGGCA ACGAAGAAGA CGACTGCTCC GAAGCCGACG
GTGGCCAAAT CTGAGGTCAG CGGTGTGCCT GTCATGATCA AGAAGACAGC ATCCGGTGCG
ACCTTCGTCT TCGACGGCAA GACGGCGCCC GGTTTTGATC AATTCGTCCA GGAAAGGCTG
AAGGGCCTGT TCCAGGAGTT CAACAAGGAC AGAGGAGCGT AA
 
Protein sequence
MARKNLIEIS APNPARADAV ALRDNRPIAG FVPQERSAAP VGGITKTLGN ITEKMERASE 
LERQLASGQT IIELDPGLID ASFVSDRLAI DAAELAQLVE QIREHGQQVP ILVRPHPESR
GRYQVAYGHR RLAATREIGI RVRAVVRDLT DGQLVVSQGQ ENSARTNLSY IERALFASRL
EERSFGRDVI MAALGVDKAA LSRMLIVIRQ VPLTLVNAIG AAPDIGRRRW LELGERLEKA
DVEKIIAELS ADDARKISSD ERFHRALVLA TKKTTAPKPT VAKSEVSGVP VMIKKTASGA
TFVFDGKTAP GFDQFVQERL KGLFQEFNKD RGA