Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5189 |
Symbol | |
ID | 8007085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | - |
Start bp | 596076 |
End bp | 596717 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644822099 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_002973359 |
Protein GI | 241113524 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.814448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.223105 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCG ACGACCATAT CGTCTTCGTC GTCGACGACG ATGAACGTGT TCGGGAAGCG CTCAGCGAGC TGCTGGACTC GCACGGCATG CGCGCCATCA CCTTCGAATC GGCCGGCGAC TACGTGAAAG CGGACAAGCC GGACGTGCCC GCCTGCCTCA TCCTCGATAT CGAGCTGCCT GACATCAACG GCCTCGACCT GCAGAGACAG ATCGCCGACA GGGATCATCC GCCGATCGTC TTCATCACAG GTCACGGCGA CATTCCCTCC TCCGTGCGTG CGATCAAGCA CGGCGCGGTG GATTTCCTGA CCAAACCCTT TAGCGATGCG GACCTGATGG CAGCAATCCA CGCGGCGCTC GCTGAGGATC TGGAAAAGAG ATCGCAACGC GCCGAACTCG ATATGCTGAG GCGACACTAT CTCGACCTGA CGCCACGAGA GCGCGAGGTG CTGCCGCTGG TCGTCAGCGG TCTTCTCAAC AAGCAGGCAG CAGCCGAATT GGGGATCAGC GAAGTGACGC TGCAAATCCA CAGAAGAAAT GTGATGCAGA AAATGGCCGC GGCATCGCTC GCCGATCTGG TGCGGATCGC GGAGAGATTG GAAATACCGA TAACCCACTC GCGCCGAGTG GGAGGGAATT GA
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Protein sequence | MTADDHIVFV VDDDERVREA LSELLDSHGM RAITFESAGD YVKADKPDVP ACLILDIELP DINGLDLQRQ IADRDHPPIV FITGHGDIPS SVRAIKHGAV DFLTKPFSDA DLMAAIHAAL AEDLEKRSQR AELDMLRRHY LDLTPREREV LPLVVSGLLN KQAAAELGIS EVTLQIHRRN VMQKMAAASL ADLVRIAERL EIPITHSRRV GGN
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