Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5185 |
Symbol | |
ID | 8007081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | - |
Start bp | 593375 |
End bp | 594040 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644822095 |
Product | nitroreductase |
Protein accession | YP_002973355 |
Protein GI | 241113520 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0863183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.13215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTAT ATGAGGCAGT CAAAAGTCGA CGGTCGGTGC GAGGGTTCAA AGACGAGCCT GTGGAGAGGG AGGTGCTTGA GCGTGTGCTG TCCGCCGCAG CTTGGTCGCC GTCAGGATCG AACATCCAGC CGTGGAATAC CTATGTGATG ACCGGCGCAT CGCTGGCAGA GCTCAAGACG TCCGCCGTCG AGCGCGTGGC CCATGGCGAC GCCTGGGATA AGCGGCAATA CGAGATGTAC CCGGCCGGGC TGAAGCCCCC CTACGGCGAG CGCCGGTCCG CCTTTGGCAA GGAGCGCTAC AGCGCGCTCG GCATTGCGCG CGAGGACTGG GAGGCGCGCC AGCGGGCAGC AATCGCCAAC TGGAACTGTT TCGGCGCGCC CGCCGCCCTA TTCTGCTACA TCGACCGTGA CCTCGGCCTA CCCCAATGGG CCGACGTCGG CATGTATCTG CAGACCATCA TGCTGCTGCT CCGCGCCGAA GGTCTGCACA GTTGCCCGCA GATGGCGTGG TCGCAGGTTC GCGAGACGGT CGCGGAGGTC CTGTCGCCCC CGGACGGGCT CATCCTCTTC TGCGGCATGT CGATCGGGTA CGAGGACCCC ACGGTTAGTT ACGCCCGTAC AGGCCGCGCC CCGCTCGACG AGACGGTCAC GTTCCTCGGC GATTAG
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Protein sequence | MDVYEAVKSR RSVRGFKDEP VEREVLERVL SAAAWSPSGS NIQPWNTYVM TGASLAELKT SAVERVAHGD AWDKRQYEMY PAGLKPPYGE RRSAFGKERY SALGIAREDW EARQRAAIAN WNCFGAPAAL FCYIDRDLGL PQWADVGMYL QTIMLLLRAE GLHSCPQMAW SQVRETVAEV LSPPDGLILF CGMSIGYEDP TVSYARTGRA PLDETVTFLG D
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