Gene Rleg_5177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5177 
Symbol 
ID8007073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp583210 
End bp583926 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content60% 
IMG OID644822087 
Productregulatory protein GntR HTH 
Protein accessionYP_002973347 
Protein GI241113512 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.835231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.258028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACAT TCGCGGTCGA TGCCGGTTCG AACAGGGGCG CAACGCGCTT CAGCGACATC 
ATCTACGAGA AGATCGTGGG GATGATCGCC GACGGCAACT TTCCGGTGAA CGAACGACTG
CCGCCGGAGA CGAAGCTGGC CGCTGATTTC GGCGCATCGA GACCCGTCGT GCGCGAAGCG
CTCGAACGCT TGAGAGCCGA TGGGTTGGTC GTTTCGCGCA AAGGTTCCGG TTCCTATGTC
AGGCAAAGGC CGGATTCGTC GATGCTGAAA ATGGTGCCGG TCGGCTCCTT GGCCGATGTC
CAGCGGTTCT TCGAATTTCG CGCCGGTCTC GAAGCCGAAG CGGCTGAGCT TGCGGCACGA
AACTGGCAAC CGGACGACAG GGAGCGGATA ATGGCAGCGC TTCTTTCGAT CGAGCAATGC
TTGCGCGATG GGGAGCTTGG TGCCGAGGAG GACCAGGCTC TGCATGATGC AATTGCCATG
GCGACCGGTA ACCAGTTCCA CATCACCATG CGCGAGTGGT TCAAGCCGCA TTTCGCCATC
GGGCATTCCG TTACGCGAAG CTTGAGCCTG AAGCGGACGC CGGAACAGAT CCGCAGCGTC
CAGGATGAGC ATGCGGTGAT CGTCGAGGCG ATCTTCGCGC ACCGGGAAAC CGAAGCGCAC
GATGCGATGA AGAAACACAT ACTGAATGCT CGCGCCCGCA TGTTCCAGGG CGTTTGA
 
Protein sequence
MVTFAVDAGS NRGATRFSDI IYEKIVGMIA DGNFPVNERL PPETKLAADF GASRPVVREA 
LERLRADGLV VSRKGSGSYV RQRPDSSMLK MVPVGSLADV QRFFEFRAGL EAEAAELAAR
NWQPDDRERI MAALLSIEQC LRDGELGAEE DQALHDAIAM ATGNQFHITM REWFKPHFAI
GHSVTRSLSL KRTPEQIRSV QDEHAVIVEA IFAHRETEAH DAMKKHILNA RARMFQGV