Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5177 |
Symbol | |
ID | 8007073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | - |
Start bp | 583210 |
End bp | 583926 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644822087 |
Product | regulatory protein GntR HTH |
Protein accession | YP_002973347 |
Protein GI | 241113512 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.835231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.258028 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGACAT TCGCGGTCGA TGCCGGTTCG AACAGGGGCG CAACGCGCTT CAGCGACATC ATCTACGAGA AGATCGTGGG GATGATCGCC GACGGCAACT TTCCGGTGAA CGAACGACTG CCGCCGGAGA CGAAGCTGGC CGCTGATTTC GGCGCATCGA GACCCGTCGT GCGCGAAGCG CTCGAACGCT TGAGAGCCGA TGGGTTGGTC GTTTCGCGCA AAGGTTCCGG TTCCTATGTC AGGCAAAGGC CGGATTCGTC GATGCTGAAA ATGGTGCCGG TCGGCTCCTT GGCCGATGTC CAGCGGTTCT TCGAATTTCG CGCCGGTCTC GAAGCCGAAG CGGCTGAGCT TGCGGCACGA AACTGGCAAC CGGACGACAG GGAGCGGATA ATGGCAGCGC TTCTTTCGAT CGAGCAATGC TTGCGCGATG GGGAGCTTGG TGCCGAGGAG GACCAGGCTC TGCATGATGC AATTGCCATG GCGACCGGTA ACCAGTTCCA CATCACCATG CGCGAGTGGT TCAAGCCGCA TTTCGCCATC GGGCATTCCG TTACGCGAAG CTTGAGCCTG AAGCGGACGC CGGAACAGAT CCGCAGCGTC CAGGATGAGC ATGCGGTGAT CGTCGAGGCG ATCTTCGCGC ACCGGGAAAC CGAAGCGCAC GATGCGATGA AGAAACACAT ACTGAATGCT CGCGCCCGCA TGTTCCAGGG CGTTTGA
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Protein sequence | MVTFAVDAGS NRGATRFSDI IYEKIVGMIA DGNFPVNERL PPETKLAADF GASRPVVREA LERLRADGLV VSRKGSGSYV RQRPDSSMLK MVPVGSLADV QRFFEFRAGL EAEAAELAAR NWQPDDRERI MAALLSIEQC LRDGELGAEE DQALHDAIAM ATGNQFHITM REWFKPHFAI GHSVTRSLSL KRTPEQIRSV QDEHAVIVEA IFAHRETEAH DAMKKHILNA RARMFQGV
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