Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5175 |
Symbol | |
ID | 8007071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | - |
Start bp | 581471 |
End bp | 582361 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644822085 |
Product | SMP-30/Gluconolaconase/LRE domain protein |
Protein accession | YP_002973345 |
Protein GI | 241113510 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0979633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.105367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGC CTCGGATCAT CCGCCCGGAC GTCCGCTCCG TGAGCGAGCA GCCGCTGACG GTCGGTGAAT CGCCGGTATG GGACGACGAG ACCGGCACTT TGTGGTTCGT CGATATTCTG GCGCCAGCAC TCGTTCGGCT CTCGGCTTCA GGAAAGAACG ACCGCTTTGA GATGCCGGCC GCCATCGGCG CGCTCGGGCT TTGCCGCGAT CAAAGGATCG TCGTGGCGCT CCAGACAGGC GTCCATCTCT TCGATCCCGT CTCCGGAGAT TTCGAGTTTG TGTCCGATCC GGTCGGACGC GACATCAATT GCCGCCTCAA CGATGGAAAG GTCGGTCCCG ACGGGCACTT CTGGATCGGC TCGATCAGCG AATCCAAGCC ACAGATCGAT GAGGCCGCAC TTTTCCGCGT GGGCGCCGAC GGCAGCACCC GGACCGTGGC CACGAAACTG ACGAGCTCCA ATGGCCTTGC CTGGTCGCCG GACGGCCGGC GGATGTATCA TTCCGACAGC CGGCAATGCT TCCTGCAGGC ATTCGATTTC GATCCTGATA CGGGCGACCT CGGCGATGGG CGCCGGCTTC GCAGCTTCAC GGAAGACGAG GGTCGGCCGG ATGGAGCGAC AACCGATCGT GACGGGTTCT ACTGGAGCGC CGGGGTTTCC GCCGGTCGCC TCAACCGAAT TTCGCCTGAA GGCGACATCG TCGAAATCTA CATTCTGCCG GTCGCTGCAC CGACGATGCC GTGTTTCGGG GGGCCGGATC TGCGCACCCT CTTCGTCACG TGCCTGTCGA CAGACCGCAC CGGACGTTTC GAGGCGGGGA AGGTCATCGC CTTCGACGTG GATGCAGAGG GCCTGCCACC GTTTCGCTTC GGGGATCATC CCGTGGGATG A
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Protein sequence | MTAPRIIRPD VRSVSEQPLT VGESPVWDDE TGTLWFVDIL APALVRLSAS GKNDRFEMPA AIGALGLCRD QRIVVALQTG VHLFDPVSGD FEFVSDPVGR DINCRLNDGK VGPDGHFWIG SISESKPQID EAALFRVGAD GSTRTVATKL TSSNGLAWSP DGRRMYHSDS RQCFLQAFDF DPDTGDLGDG RRLRSFTEDE GRPDGATTDR DGFYWSAGVS AGRLNRISPE GDIVEIYILP VAAPTMPCFG GPDLRTLFVT CLSTDRTGRF EAGKVIAFDV DAEGLPPFRF GDHPVG
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