Gene Rleg_5169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5169 
Symbol 
ID8007065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp575086 
End bp575829 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content63% 
IMG OID644822079 
ProductABC transporter related 
Protein accessionYP_002973339 
Protein GI241113504 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.309766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTAAAA TCGACAATCT TACGGTCCGT TTCGGACCCG GGCAGCGGCC TGTCGTTCGA 
GACGTAAGCT TCGCCATCGA AAAGGGAACT GCTTTCGGTC TGGTCGGCGA GTCCGGCTGC
GGGAAGTCCA CTGTCTTGAG GGCGCTTTCC GGCCTCAACG CCAACTATGA CGGCCGGATC
GAGCTCCACG GCGAGCCGTT AAGTCAACGG CGCAGTCGGC CATTCTTCCG CCGGGTGCAG
ATGGTGTTCC AGGACCCCTA CGGATCCCTC CATCCCCGCA AGACCATCCG CTCGCAGCTG
AAAGAACCGC TGCGCAACCA GGGCCTCGAT ACGAATTCCG TCGACGTCAA CGCCGTCCTG
AGATCGGTCG GCCTCGATCC GGCGCTGAGC TACCGATTTC CGCACCAGCT CTCCGGCGGC
CAGCGCCAGC GCGTGGCCAT CGCCCGCGCG CTGATGCTGA ATCCGGACGT TCTGCTTCTC
GACGAACCGA CATCGGCGCT CGACGTGTCA GTTCAGGCCG AGATCCTCAA TCTCCTCCAG
GATTTGCGCG TCAATCGCGG TCTGACCTAT CTGCTCGTCA GCCACGACCT CGCCGTCGTC
TCGCATATGT GCAGCCGCGT CGCCATCATG GAAGCGGGCG AAATCGTCGA ACAGGTCGAT
GTCGGCGCCC TCCGAAGAGG TGCGGTCGAA CACCCCTATT CGCAACGCCT GCTGCGCGCG
AGCCGGATGT ACGGAAGGGC GTAG
 
Protein sequence
MIKIDNLTVR FGPGQRPVVR DVSFAIEKGT AFGLVGESGC GKSTVLRALS GLNANYDGRI 
ELHGEPLSQR RSRPFFRRVQ MVFQDPYGSL HPRKTIRSQL KEPLRNQGLD TNSVDVNAVL
RSVGLDPALS YRFPHQLSGG QRQRVAIARA LMLNPDVLLL DEPTSALDVS VQAEILNLLQ
DLRVNRGLTY LLVSHDLAVV SHMCSRVAIM EAGEIVEQVD VGALRRGAVE HPYSQRLLRA
SRMYGRA