| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5127 |
|---|
| Symbol | |
|---|
| ID | 8006987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 526191 |
|---|
| End bp | 526919 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644822040 |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_002973300 |
|---|
| Protein GI | 241113465 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.336729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0539363 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGATC AATCAATCAA AATCCTGACC TATAACGTGC ACAGTTGTAT CGGCGGCGAC
CGGAAGCTCG ATCCCGGCCG CATCGCTTCT GTCATTGCCG AGGCTGAGGC TGATATCGTC
GCTCTTCAGG AGGTCGACGT CCTCCGCCGC AGGACCGGCG GCGTCGACCA GGCCCATGCG
ATCGCCTCGC TTTTGAAGAT GCAGGCTCAT TTCCATCCGG CGCTGTCGAT CGCTGAGGAG
CAGTATGGCG ATGCGATCAT CACTTCGCTG CCGACCGGCG CGGTCAAGGC CGGACCATTG
CCATCCATCG GCGAACAGCG CGGCGCCATT TCCGTCGAAA TATTGGTCGG CAACAGAAAA
CTGCTGGTCG TCAACACCCA TCTCGGCCTT CGCGGCCGCG AGCGCATCCG GCAGATGACG
ACATTGCTGA ACCCCGGCTG GCTACGCGGC ACGACAGATG AACCTCTTCC AACCATCCTC
TGCGGCGATT TCAACGCCAT TCCGTCATCG GCGACTTACC GACTTGCCGC GCGGTCATTG
AAGGACGCCC AGCTCGCAGG CAGCGCCGCG CCGAGAGCCA CCTTTCCCTC GCGCTACCCG
CTGATGCGCC TCGACCACAT CTTCGTCACT GACGATCTCA TCGTCAAACA GGCGGCGGTC
CTGGAAAACC GCCTGACAAG GATTGCCTCG GACCACCTGC CTCTGCTCGC GGAAATCGGC
TTTGCCTGA
|
|---|
| Protein sequence | MPDQSIKILT YNVHSCIGGD RKLDPGRIAS VIAEAEADIV ALQEVDVLRR RTGGVDQAHA
IASLLKMQAH FHPALSIAEE QYGDAIITSL PTGAVKAGPL PSIGEQRGAI SVEILVGNRK
LLVVNTHLGL RGRERIRQMT TLLNPGWLRG TTDEPLPTIL CGDFNAIPSS ATYRLAARSL
KDAQLAGSAA PRATFPSRYP LMRLDHIFVT DDLIVKQAAV LENRLTRIAS DHLPLLAEIG
FA
|
|---|
| |