Gene Rleg_5125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5125 
Symbol 
ID8006985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp524464 
End bp525600 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content66% 
IMG OID644822038 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002973298 
Protein GI241113463 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.78521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0962359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTT CCACCAAACC TTCGAAGGTC GTCGTCATCG GCGGCGGGAT CTTTGGCGTC 
TCGACGGCTG TCCATCTGGC ACGGCTCGGG GTCCGCATCG TGCTCATCAA TGACGGCCCG
CTCGCCAACG GCGCCTCCGG TCGTTCGCTC GCCTGGCTCA ATTCGGCGCG CAAACGCACC
GATGCCTATC ACCGGCTGCG GTTGGCCGGC ATAGATCGCT ACCGCACGCT GGCCGTCCGG
TATCCCGATG CGCCGTGGCT GTGCTTCGAT GGCGGCCTGA CCTGGGATGC GGACGATGCC
GGCAACGAGA TCGCTGAGAT CTTCGACTAT GAGCGCGATC TCGGCTATCA CGCGCAGTGG
CTCGCCCCCG AACGAATTGC TGCAGCGACG CCGGGTGTCG ATGCAAGTGT GGTGACGCGG
CAAGGCGCGA TCTTCAACCC CGGGGAGGGC TGGGTCGATC TTCCGTCCTT GATCGCCACG
CTTGTGGAAG AATTCCGCAC GCTGGGCGGC GAGATCATCA CGGACGCGGG TCGCGCGACG
GTCGATATTG AAGGCGGGCG CGCCCGTGGC GTGATCACCG CAGACGGCAT GCGCCGCGAC
GCGGATGCCG TGCTGCTTGC TGCCGGCGGC GACGTTCCCG CAATCGTTGC CGAGGCCGGC
CAGCATATCG GCGATGCAAC GCCCGTCGCC CTTCTCGTCA GGACAAAGCC GATCCGCCAC
CCGTTGAAGG CCGTGCTCAA TACCCCTCGC GTCGCCATCC GGCCGACGCC CAACGGTGGC
TTCGCGCTCG ATTCCGCCTG GTCCGAGGAG GAGGTGAGCG TGAAGCCCGA CGGCAGCTAT
GAAATCAGAC AATCGACGCT GGAGGGGCTG CTGCGCGAGG CTTCCAGGGT TCTCGAAGGC
AATCCTGCGC TGGAGGTCGA AGATTATGGG GTCGGCCTCA AGCCTATCCC GGGCGACGGC
GAGCCCGTTT TCGGCGAACT GCCGTCGATC CCGGGTTATT TCGTCGCCTT CAGCCATAGC
GGCGCCACCC TCGGCCTGAT TGCCGGCGAA CTGCTGGCGG ACGAGATCGT CACTGGACGC
AGGCATCCGC TGCTGGCGGA ATTTCGGCCG GAGCGTTTCA GCGCGTCGCG ACGATGA
 
Protein sequence
MNASTKPSKV VVIGGGIFGV STAVHLARLG VRIVLINDGP LANGASGRSL AWLNSARKRT 
DAYHRLRLAG IDRYRTLAVR YPDAPWLCFD GGLTWDADDA GNEIAEIFDY ERDLGYHAQW
LAPERIAAAT PGVDASVVTR QGAIFNPGEG WVDLPSLIAT LVEEFRTLGG EIITDAGRAT
VDIEGGRARG VITADGMRRD ADAVLLAAGG DVPAIVAEAG QHIGDATPVA LLVRTKPIRH
PLKAVLNTPR VAIRPTPNGG FALDSAWSEE EVSVKPDGSY EIRQSTLEGL LREASRVLEG
NPALEVEDYG VGLKPIPGDG EPVFGELPSI PGYFVAFSHS GATLGLIAGE LLADEIVTGR
RHPLLAEFRP ERFSASRR