Gene Rleg_5123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5123 
Symbol 
ID8006983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp521917 
End bp522744 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content58% 
IMG OID644822036 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002973296 
Protein GI241113461 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.12567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTT TTCTATTTTT TCCGGCCATC ATGGCCCCGT TGCGGGCCGG CCTTGTCACA 
TGCCTTCTTG CGATGGGGGC AGGTTCTGCG GCCGCAGCCG ACAATCCCTA TAACCTGATC
GAGCCAGGGA CTATCAGCGT CGGCACGATG GGCGATTCCA AGCCCTACAC GTTTGCCACG
GCGGACGGCC AGTTTACCGG TTTCGATATC GAGTTGTTTC TCAACGTCGT CTCCCGCCTC
GGCTTTCAAA AAGACAAGGT GACGTTTACG GGCCAGGAAT TTTCAGCACT CCTGCCGTCG
GTCGCAAACG AAAGGTTCGA CGTTGCCGTT GCGGCGATCG GAACCACCGA AGCCCGCAAG
AAGACCATCG ACTTTTCCGA CGGCTATCTT GCCGGTTATC TCTCCGTGCT GACCCCGGAT
GCCGGTATCA AGGATGCCGA TGGCCTCAAG GGCAAGCGTC TCGGGGTCGT GCAGGGGACC
TTGCAGGAAG TCTATGCGGC CAAGAATTTC GAGGGAACCG ATCTGGTGAA ATTCCCCGAC
AACAATTCTG CCGTGGCTGC CCTCAACAAC GGAACGGTCG ATGCGCATTT TCTCGACTAC
GAGGCCGCCA AGCAATATGG CGAGCGCTAT CCCGCGCTGA AGGTTGCCGT GAATATCCCC
TCCTTCGATG CGCCTGCTGG CTTCGTGGTC CGAAAAGGAA ATGACGCCTT TCGCACGGCG
CTCAACGGCG CGCTTCACGA TGCGATGCAG GACGGCACCT GGAAGACCCT TTACGAAAAG
TGGTTCCCCG GCTCGCCGAT GCCGGAACAG TATCTTCCCA AGAAGTGA
 
Protein sequence
MKPFLFFPAI MAPLRAGLVT CLLAMGAGSA AAADNPYNLI EPGTISVGTM GDSKPYTFAT 
ADGQFTGFDI ELFLNVVSRL GFQKDKVTFT GQEFSALLPS VANERFDVAV AAIGTTEARK
KTIDFSDGYL AGYLSVLTPD AGIKDADGLK GKRLGVVQGT LQEVYAAKNF EGTDLVKFPD
NNSAVAALNN GTVDAHFLDY EAAKQYGERY PALKVAVNIP SFDAPAGFVV RKGNDAFRTA
LNGALHDAMQ DGTWKTLYEK WFPGSPMPEQ YLPKK