| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5075 |
|---|
| Symbol | |
|---|
| ID | 8007668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 458813 |
|---|
| End bp | 460174 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644821990 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002973250 |
|---|
| Protein GI | 241113415 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.550975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.411558 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAA TCGAACAAAA CTCCAGGGCT TACGCACAGT TGAAGCCGGC CTCTCTCGCC
ATTCTCTGCC TCGGCGTGAT CGTGGCGCAG GTCGATACAT CGGTCGTTAA TCTGGCGGTT
CAGCCAATCG GACTCGATCT CAAAGCCTCC GTCACCGAGC TGCAATGGGT CGTCGACGCC
TACAATCTCG TTTACGCAGC ACTTCTCATC AGCGGCGGCT TGTTCGCCGA TCTTTACGGC
CGACGTCTGA TGTTCGTGAT CGGCTGCGCT GTCTTTGCGC TGGCGAGCCT TGGCTGCGCA
TTCGCCTCGA CCATCGCGAT CCTCATCGCC GCGAGAGCCT TGACCGGCTT CGGCTCCGCC
CTCCTGCTGC CCGCTTCGCT TTCGCTGATC CGGGTCATCT ACCGGGATGA GAAGGTCCGT
GCCCGAGCGC TCGGGATCTG GGCCGGCTGC AATGGAATGT CGCTTGCGAT CGGCCCAAGC
CTCGGCGGCT TCCTCATCCG TGATTTCGGC TGGCGATCCG TCTTCTTCGT CGTCATCCCC
ATCGCGCTGA TCGCGGCGGC GGCGGCACGG TTTTTCGTTC CGGAAAGCGC CGATCGGCAA
GGCCGGTCCT TCGACATGCC GGGTCAGTTG CTGGGGATAG CATCCCTCAC CGTTCTTACC
CTCACGGCGA TCGAATCATT GCATCTGCCG CCTTTGTGGA CGGCCCTCCT GGCCATCGCC
GGCGCCCTGC TTCTGCTGCT CTTCATCATC GTCGAAAAGC GCCTGGAGCA GACGGCTCTG
GTTCCGATCT CGATGTTTTC GGGCAGGCAG TTTCGCGGTG CGATGGCCGG AACGGCGGCA
ATGACGTTCG GCATGTATGG CACGCTCTTT CTCTTTCCAC TCGCCTCCCT CAGCCTTCGA
CGCCTGGCCT CGGTGGAGGT CGGGCTGTCT CTGCTGCCAA TGGCCATCAG CTTCATCGCG
ATCTCACCCT TCTCCGGTTC GATCTCGGAG CGCCTGGGGA AGAAACGCAC CATATCGGCG
GGACTGGCGC TGATGGGTTT GGGCAACCTT CTGCTCGGCT CATCCTTTCT GGCCGATTGG
TTCATTGCCG AAGAGGTCGG ATTGTTGCTG ACCGGGGTCG GGATGGGCAT GGCGACGGGG
CCTCTGACGG CGGTCGCGGT TTCAACCGTG GCGGCCGATC GCGCCGGCAC GGCGAGCGCC
CTGATCAATG TTGCCCGCAT GGTCGGGGCG ACGATAGGCG TCGCCTTACT GGGAGCGATC
TTCGCCTTTT TGGGAGAAGC AGAAACGGCC TTCATCGTCG CGATGTCGGT CGGCGGCAGC
ACGCAACTGC TTGGAAGCCT CGCTGCCTGG CGCTTGCTCT GA
|
|---|
| Protein sequence | MNSIEQNSRA YAQLKPASLA ILCLGVIVAQ VDTSVVNLAV QPIGLDLKAS VTELQWVVDA
YNLVYAALLI SGGLFADLYG RRLMFVIGCA VFALASLGCA FASTIAILIA ARALTGFGSA
LLLPASLSLI RVIYRDEKVR ARALGIWAGC NGMSLAIGPS LGGFLIRDFG WRSVFFVVIP
IALIAAAAAR FFVPESADRQ GRSFDMPGQL LGIASLTVLT LTAIESLHLP PLWTALLAIA
GALLLLLFII VEKRLEQTAL VPISMFSGRQ FRGAMAGTAA MTFGMYGTLF LFPLASLSLR
RLASVEVGLS LLPMAISFIA ISPFSGSISE RLGKKRTISA GLALMGLGNL LLGSSFLADW
FIAEEVGLLL TGVGMGMATG PLTAVAVSTV AADRAGTASA LINVARMVGA TIGVALLGAI
FAFLGEAETA FIVAMSVGGS TQLLGSLAAW RLL
|
|---|
| |