| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5062 |
|---|
| Symbol | |
|---|
| ID | 8007655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 445025 |
|---|
| End bp | 445843 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644821977 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002973237 |
|---|
| Protein GI | 241113402 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.948706 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACATG ACAAGAACGA GATCCCGGCG ATCGAGCTGA TCAACGTCAG CCGCCGCTTC
GTCTCGCCGA CCGGCAAGTC CCTGACGGCC TTGCGCGATT TCAACATGAC GGTCGCCCGC
GGAGAGTTCG TCGCCGTCGT CGGCCCCACC GGATGTGGTA AATCGACGAC GCTCAATCTT
GTGACGGGTC TCGCCCGCCC CAGCGCCGGT GAAGTCCGGC TGATGGGCGG CCCGATCACC
GGCATTGACC CGCGTGTCGG CTTCGCATTC CAGACCGACG CGCTCTTTCC CTGGAAGAAC
GTCATCGACA ACGTCATGGC CGGTCCGCTG TTTCGAGGCA AGTCGCGCGC CGAGGCAGAA
AAGAGCGCAC GCGACTGGCT CGCCCGTGTC GGCCTTTCGA AGTTTCTCCA TCATTATCCC
CACCAGCTGT CAGGCGGCAT GCGCAAACGC GTCTCGCTGG CACAGACCTT CATCAACGAG
CCGGAAATCC TGCTGATGGA CGAGCCGTTT TCGGCTCTCG ACGTGCAGAC CCGCACCGTC
ATGCACGAAG AGCTCTTGAA ACTGTGGGCC GAGCGCAAGG CCTCGGTGGT GTTCGTCACC
CACGACCTCG AAGAAGCTGT CGCCCTTGCC GACAAGGTCT ATGTCCTGAC CGCCGGCCCC
GCGACGGTCA AGTCGGTCTA CACGATCGAT CTCCCCCGTC CGCGCGTCGT GTCGGAAATC
CGCTACGAGC AGGCCTTCAT CGACTACTGC AAGACGATCT GGGAGGACCT CCGCGAAGAG
GTCGAGACCA GCTACCGCCG CGCGAGCGAA GCGGCCTGA
|
|---|
| Protein sequence | MQHDKNEIPA IELINVSRRF VSPTGKSLTA LRDFNMTVAR GEFVAVVGPT GCGKSTTLNL
VTGLARPSAG EVRLMGGPIT GIDPRVGFAF QTDALFPWKN VIDNVMAGPL FRGKSRAEAE
KSARDWLARV GLSKFLHHYP HQLSGGMRKR VSLAQTFINE PEILLMDEPF SALDVQTRTV
MHEELLKLWA ERKASVVFVT HDLEEAVALA DKVYVLTAGP ATVKSVYTID LPRPRVVSEI
RYEQAFIDYC KTIWEDLREE VETSYRRASE AA
|
|---|
| |