Gene Rleg_5059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5059 
Symbol 
ID8007652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp441990 
End bp442658 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content59% 
IMG OID644821974 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002973234 
Protein GI241113399 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.118223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGC TTGTGGTGGA GGACAACAAG GATCTGGCGG CCTGGCTGGG CAAAGCCCTG 
CGACAGGCGC AATATGCTAT CGATATTGCC CATGACGGCG AGGACGCCGA GCATTTGCTC
AAGGTGGCTG AGTATTCGGC GATGATCCTC GATCTTGCTC TGCCCAAACT TGACGGGTTA
ACGCTTTTAA AACGATTGCG GCAGTCCGGG AGCAAGCTGC CGGTCATCAT CTTGACCGCG
AATGCCAGCC TGGACGGCCG TGTGGCGGGG CTCGACAGCG GCGCCGACGA CTATCTCGCC
AAGCCCTTCG AAATCGCCGA GCTCGAAGCG AGGATCCGTG CGGTGGTCCG CCGCGGCCAG
GATCGGGCTT CGTCGGAAAT CACCGTCGGC AACCTGCTTT TTTCCGGTGG GACGCGGCAG
TTTTTCGTCG CAGGCGAGCC GCTGCAATTG ACGCCGCGCG AATATGCCGT TCTCGAGCAG
CTCGTCATGA AGCATGGCAT CACGGTTTCG AAAGCCGCGC TTTCTGAAAG CGTCTTCGGT
TTCGACGACG AGGCGGATGC GAGCGCCATC GAAATCTACG TCCACAGGCT GCGAAAGAAA
CTGGAGAGCA GTTCGGTTCA GATTGCGACG TTGCGCGGGC TCGGTTATCT CCTCCGACAT
GTCCAGTAG
 
Protein sequence
MRLLVVEDNK DLAAWLGKAL RQAQYAIDIA HDGEDAEHLL KVAEYSAMIL DLALPKLDGL 
TLLKRLRQSG SKLPVIILTA NASLDGRVAG LDSGADDYLA KPFEIAELEA RIRAVVRRGQ
DRASSEITVG NLLFSGGTRQ FFVAGEPLQL TPREYAVLEQ LVMKHGITVS KAALSESVFG
FDDEADASAI EIYVHRLRKK LESSSVQIAT LRGLGYLLRH VQ