Gene Rleg_5057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5057 
Symbol 
ID8007650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp441254 
End bp441820 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content61% 
IMG OID644821972 
Productisochorismatase hydrolase 
Protein accessionYP_002973232 
Protein GI241113397 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.136743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCC ATGATACTGT CCTTCTCGTT ATCGACGCCC AGGAGTCTTT CAGACACCGC 
GATTACTGGG ATGAAAACCT CGCCTCCGCC TATATCGATC GTCAGCAGGC TCTGATCGAC
GGTGCGGAAG CCGATGGGAT ACCCATCATC CAAATCTTCC ATGTCGATGA AAACGGGCCG
TTTTCGGAAG CATCTGGGTT CGTCAGCACA CTCGCCCCGC TCAGGATCGC CCCCAAGGCG
ACGTTCAGGA AGAGGCGCCA TAGCGCCCTG GTCGGTTCCG GTCTCGACGT GTGGCTGACC
GAGAACGGCG TCCGTCGTAT CCTCGTCTCC GGCATCCGCA CCGAACAGTG CTGCGAGACC
ACGACCCGTC ATGCCTCCGA TCTCGGCTAT CAAGTCGACT ATGTCGGCGA AGCGACGCTG
ACCTTCCCGA TGACCGACGC CACAGGACGC ACTTGGAGCG CGAAGGAAAT CCGGGACCGG
ACCGAATTGG TCCTGTCGGG CCGGTTTGCT CGGATCGCGA CCGTCGACCA GGCCCTGGCG
GGGCGTGGAA AGTCACTCGC CGCATGA
 
Protein sequence
MSGHDTVLLV IDAQESFRHR DYWDENLASA YIDRQQALID GAEADGIPII QIFHVDENGP 
FSEASGFVST LAPLRIAPKA TFRKRRHSAL VGSGLDVWLT ENGVRRILVS GIRTEQCCET
TTRHASDLGY QVDYVGEATL TFPMTDATGR TWSAKEIRDR TELVLSGRFA RIATVDQALA
GRGKSLAA