Gene Rleg_5055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5055 
Symbol 
ID8007648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp439431 
End bp440216 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content61% 
IMG OID644821970 
Producthypothetical protein 
Protein accessionYP_002973230 
Protein GI241113395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00118932 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTGA CGCTGAAGAT CGTGGATGCC GGTGGGGCGG TGCTGGCGAG TTCCATCGGC 
CGGGACGAGA CGTTCCTGGT CTATCGCCAG AGCTATCGCG AAGGCGATCG CGTGGTCGTG
GAGGTCTCCG AGCCCGGACA TGTCTTCCTC TCCCTTGATG GCGCGGTCCA GCCCGGCCTG
GTCTATATGA AGGAATGCGC CTATTCGCTC GCCGTGCCCT TCGGCGATAA GCGCAAGCCC
TATTCGCCGA ATGCCTTCAG GGGCGATATC CACCGGCTTT CAGCGCGAAG CACACGCCCT
GACGAGATCG TCCATCGGCG CAATCTCGCC CTCAACCCCT GGGACGATCA CGCCAATCGG
GCTCTGTTTC CGCATGCGCG CGCCAACGTC GAGACCCGCG GCGAAGCGGT CTTCGCCGCG
CGCAACGCGA TCGACGGCGA GAAGGCCAAC GATGATCACG GCTTCTGGCC CTATACGAGC
TGGGGCATCA ATCGCGATCC GCAAGCAGCA CTGACGGTGG AATTCGGCAG GCCGGTCAGG
ATAGACGAGG TCGTTTTCTA TCTCCGGGCC GACTTTCCGC ATGATTCCTG GTGGGAAAAG
GCCAGCGTCA CCTTCTCGAA TGGCAAGACC TCCTGTTTTT CGCTGGTGAA ATCGGGCACC
GCGCAGGGCT TTTCCATAGA ACCATGCATC GTCGAATGGG TGGAACTGCA CGGCCTGATC
AAGGCCGAAG ACGCCTCGCC CTATCCGGCG CTGACTCAGA TCGAAATCTG GGGAGTCGAG
GTGTAG
 
Protein sequence
MELTLKIVDA GGAVLASSIG RDETFLVYRQ SYREGDRVVV EVSEPGHVFL SLDGAVQPGL 
VYMKECAYSL AVPFGDKRKP YSPNAFRGDI HRLSARSTRP DEIVHRRNLA LNPWDDHANR
ALFPHARANV ETRGEAVFAA RNAIDGEKAN DDHGFWPYTS WGINRDPQAA LTVEFGRPVR
IDEVVFYLRA DFPHDSWWEK ASVTFSNGKT SCFSLVKSGT AQGFSIEPCI VEWVELHGLI
KAEDASPYPA LTQIEIWGVE V