| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5004 |
|---|
| Symbol | |
|---|
| ID | 8007595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 388793 |
|---|
| End bp | 389659 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644821919 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002973179 |
|---|
| Protein GI | 241113344 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.228 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGA CAAGTTCCGA AACCACCTCC GGCCGGCTGT CCGGAACCCG GTTTGGCTAT
CGCTTCAACA TCGTCGGCGC GATTGGCTTC ACTGTGATCC TCTCATGGGC GCTCGTTGCG
ATCTTCGCGC CATGGGTCAT CCCCTACCCC GTCGGCGAGA TTATCGATCT CGACTATTTC
GGCCCGATGA GTCGGGAACT CTGGCTCGGC TCCGATTATC TCGGCCGCGA CATGCTCTCG
CGGATTCTGA TGGGCGCCCG GTATACAGTC GGTATCTCGC TCGCTGCGGT CACGATCGCC
TGCTTCAGCG GCGTCGTGCT CGGCATGATC GCAGCGGTCG CCGGCGGCTG GCTGGACACG
ATCCTCAGCC GCTTCCTCGA CGCCCTCAAC TCCATCCCGA GCAAGCTGTT CGGCCTGGTG
GTCGTCGCTG CCGTCGGCTC CTCGGTCCCG GTGCTGATCA TGACGCTGTC GGTGATCTAT
ATCCCAGGCG CTTATCGCTT CGCCCGGGCG CTCGCCGTCA ACATCAACGC GATGGATTTC
ATCACGGTTG CGCGCATCCG CGGTGAAAGC ACTCTCTATC TCATTCGCTC GGAAATCCTG
CCCAACATCG TCGGGCCGGT GCTTGCCGAT CTCGGCATCC GCTTCGTCTT CATCGTTCTG
CTGCTCTCCG GGCTTTCCTT CCTCGGTCTC GGCGTCCAGC CGCCCTATGC CGATTGGGGT
GCGCTCGTAC GTGAGAACAT CGGCGGCCTG CCATTCGGTG CGCCGGCGGT GATGTTTCCC
TCGCTTGCCA TCGCCAGCCT GACGATCAGC GTCAACCTGC TGATCGACAA CCTGCCGCAG
AAAATTCGCG ACCGGAGCAC GTCATGA
|
|---|
| Protein sequence | MTMTSSETTS GRLSGTRFGY RFNIVGAIGF TVILSWALVA IFAPWVIPYP VGEIIDLDYF
GPMSRELWLG SDYLGRDMLS RILMGARYTV GISLAAVTIA CFSGVVLGMI AAVAGGWLDT
ILSRFLDALN SIPSKLFGLV VVAAVGSSVP VLIMTLSVIY IPGAYRFARA LAVNINAMDF
ITVARIRGES TLYLIRSEIL PNIVGPVLAD LGIRFVFIVL LLSGLSFLGL GVQPPYADWG
ALVRENIGGL PFGAPAVMFP SLAIASLTIS VNLLIDNLPQ KIRDRSTS
|
|---|
| |