Gene Rleg_4954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4954 
Symbol 
ID8007547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp335279 
End bp335950 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content59% 
IMG OID644821871 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002973131 
Protein GI241113296 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00163752 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCGA AAAATTCTGT ACTTCTGCAG TCTGAACTGT TCGCTGGTTT GGATCAGGCG 
ACTGCGGAGC AATTCACCGC AACGGCTGAG CTTCGAACCT TCGCCGCTGA CGAGAAGATC
ATAACCGAGG GTCAGCAGGC ATCGTTCGTC TACTGCGTCA TGAACGGGTT TGTCCGACTT
TCAAAGTCGG AATCCGCCGG GCGCGAGGCG GATATCTGCG TGTGCGAGCC GGGCGACACC
TTTGGGGAAT ATCTCCTCGT GGGGGGCGAC TCCTATGCCT ATAGCGCGCG GTCCGCCGAC
GGGGCCGAGG TCGCGCTGTT TGCGGTTACG GACTTGCAGG CGTTCGCCGC GCAATATCCG
GTCGTACATC GGAACGTCAT GCGCATCATG GTCAGGCACC TGCTCGGCGC GATGGATTGT
ATTGCGGGAG ATCGGTTGTT GACGGCCGCG CAACGGGTGG CAAGCTATCT CATAAGCCGC
TGCTCCGCAT CGACGACCAC CACACGGATC ACGTTCCGTA TTCCTTATCG GAAGAGAATC
CTAGCCGGCA AACTGGGATT GGCACCGGAA GCCCTTTCCC GCGCATTTGC GGCGCTTGCG
GCGTCGGGCG TCAAAGTCAG AGGCAAGGCC GTCCTAATCG ACAACGTCGA TCTGCTTCGC
AAGGCGTGCT AA
 
Protein sequence
MLAKNSVLLQ SELFAGLDQA TAEQFTATAE LRTFAADEKI ITEGQQASFV YCVMNGFVRL 
SKSESAGREA DICVCEPGDT FGEYLLVGGD SYAYSARSAD GAEVALFAVT DLQAFAAQYP
VVHRNVMRIM VRHLLGAMDC IAGDRLLTAA QRVASYLISR CSASTTTTRI TFRIPYRKRI
LAGKLGLAPE ALSRAFAALA ASGVKVRGKA VLIDNVDLLR KAC