Gene Rleg_4953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4953 
Symbol 
ID8007546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp333587 
End bp335143 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content57% 
IMG OID644821870 
Producttransposase IS204/IS1001/IS1096/IS1165 family protein 
Protein accessionYP_002973130 
Protein GI241113295 
COG category[L] Replication, recombination and repair 
COG ID[COG3464] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.12169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCA AGTTTCGTCT GTCGTCCCTG ATCCCGGCCG GATTGATTGT TGAGCGTTCC 
GACGAGAGCA ACGGGGTTAT CATTGTTTCA GCGCGGGCTG CCGCCGATCG ACGTTCCTGC
CCTTTATGCA ACCGAATGTC AGATCGTGTT CATAGCCGCT ACGTTCGGAA AATTGCTGAT
TTGCCTTGTG CTGGCACCAG GGTCCAACTG CGACTATCGG CAAGGCGCTT TATCTGTGAG
ATGACATTCT GCCGTCGCCG GATCTTCGTC GAAAGGTTTG GAGAGCTTGT CGTTCCGGAG
CGCAGCCGTC GGACCGCTCG GCTTGATACC GTCGTACATC ATCTCGGGTT GGCTCTGGGA
GGGCGGCCCG CAGCAGCCTT TGCCAAACGC TTGATGATCC CAGTCAGCAA TGACACGCTG
ATCCGCGCGG TGAGAAGAAG ATCCGCTGCG TCGGATGACG CGCTAAGCGT CGTCGGCGTC
GACGATTGGG CTTTCCGCCG CAATCACCGC TATGGCACCG TCGTATGTGA TCTTGAGAAG
CGAAAGATTA TAAAGCTTCT GCCCGATCGA GAGATCGCGA CAGTTTCCAC CTTCCTTGCT
CAGCACCCCG AAATTGCGAT TGTTTCCCGC GACCGAGGCG GTGGCTATCG TGAAGCTGCC
GCCAAGGCTT TACCCCATGC CATGCAGGTC GCAGATCGTT GGCATTTGAT GGAGAACGCC
AGCGCGGCGT TCCTCGACGT CGTGCGCAAA TCCATGCGAG CGATCCGTAC CGCAATTGGT
GCTACGACGA TCAATCCTGC GCTACTCACC TGCGCTGAAC GACTGCAATA TGACAGCTAT
CTGCGGCGTG AGGACGAGAA TTCGACGATC ACCAAGCTGT CCTCCGATGG CGTTCCAATA
AAGGAAATCG TGCGACAAAC CGGCTATAGC CGCGGCACAG TTCGCCAGAT CGTCCGCGGT
CACAGAACTG ATGTGTTCCG TGTCAGACAA AGTTCCCTTG AGGCCCATCT GCCGCTGTTA
GATCAACTCT GGAGATCTGG GCAGCACAAC GGCGCTGAAC TCTGGCGACA GCTAAAGTGC
AAAGGCTTCC GTGGTTGTTC TCGTGTCGTC GGCGAGTGGG CCGCAAGGCG ACGGCGGTCT
GAGCGGATCT GCGACCAGCA ACTTCAAAAA GTGCCATCCG CCAGAACGAT TGCCCGATTG
ATGACAACTG CTCGCGATCA ACTGAGTAAA GCTGACACCA TCACCATTGC GGCCATAGAA
GCCGGCGTTC CCGCCTTGAT CCAAGCCCGC AATCTAATTG ATCGGTTCCA GACAATGATC
CGAAGGAAGG CCAGGACAGA ACTCGACCCA TGGATCGCTG ATGCGCGCGA CAGTCTGTTC
GCCCCCTTCG CCAACGGGAT ACTAAAAGAC AAGGCAGCGG TGTCCGCCGC CATCACAGAA
CCTTGGTCGA ACGGCCAGGT CGAAGGACAG ATCAACAAGC TGAAGCTCGT TAAAAGGCAA
ATGTATGGGC GTGCCAAGCT GGATCTTCTT CAGGCACGAT TGATCGGGGC AATGTGA
 
Protein sequence
MATKFRLSSL IPAGLIVERS DESNGVIIVS ARAAADRRSC PLCNRMSDRV HSRYVRKIAD 
LPCAGTRVQL RLSARRFICE MTFCRRRIFV ERFGELVVPE RSRRTARLDT VVHHLGLALG
GRPAAAFAKR LMIPVSNDTL IRAVRRRSAA SDDALSVVGV DDWAFRRNHR YGTVVCDLEK
RKIIKLLPDR EIATVSTFLA QHPEIAIVSR DRGGGYREAA AKALPHAMQV ADRWHLMENA
SAAFLDVVRK SMRAIRTAIG ATTINPALLT CAERLQYDSY LRREDENSTI TKLSSDGVPI
KEIVRQTGYS RGTVRQIVRG HRTDVFRVRQ SSLEAHLPLL DQLWRSGQHN GAELWRQLKC
KGFRGCSRVV GEWAARRRRS ERICDQQLQK VPSARTIARL MTTARDQLSK ADTITIAAIE
AGVPALIQAR NLIDRFQTMI RRKARTELDP WIADARDSLF APFANGILKD KAAVSAAITE
PWSNGQVEGQ INKLKLVKRQ MYGRAKLDLL QARLIGAM