| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4924 |
|---|
| Symbol | |
|---|
| ID | 8007519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 301314 |
|---|
| End bp | 302786 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644821843 |
|---|
| Product | nitrogenase cofactor biosynthesis protein NifB |
|---|
| Protein accession | YP_002973103 |
|---|
| Protein GI | 241113268 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGAG GGATGAGTAC GTTCAGGATC ACCGACACAG CACCTGCCGC ATGCGAGTCG
GAGGCAACAG CGTTCGGTGA CTATCCGCCT TCGTCCCGTG GCAGTTCCGA GCCGGATGCT
CTGGCTCCAG CGATCCGTGA AAAGATCAAA GACCACCCGT GCTTCTCGCG GGAAGCGCAT
CTTTATTTCG CGCGGATGCA TCTCGCGGTG GCACCAGCCT GCAACATCCA ATGCAATTAC
TGCAATCGAA AATATGACTG CGCAAACGAA AGCAGACCAG GAGTAGCATC ACATAGGCTC
ACTCCCGACC AGGCGCTGCG CAGGGCCATT GCGGTTGCAA ACGAAGTGCC GCAGCTCTCA
GTGGTCGGCA TCGCCGGGCC AGGCGATGCC TGCTATGATT GGAGGAAGAC AAAAGCGACC
CTCATACCGA TCGCCCGCGA AATCACCGAC GTCAAGCTTT GCATCTCAAC CAATGGCCTC
GCCCTCCCTG AACATGTCGA CGAGCTTGTC GACATGAATG TCGGGCACGT TACAATCACC
ATCAACATGG TAGATCCGAA GATCGGGACC GAGATCTACC CCTGGATATT CTATGATGGC
CGCCGCTACA ACGGTATCGA CGCGTCCAGG ATCCTCCATG AGAGGCAAAT GTTGGGGCTC
GAAATGCTGA CAGAACGCGG CATACTCACC AAGGTCAATT CGGTGATGAT CCCGGGCGTC
AACGACGAGC ATCTCATCGA GGTTAACAAG TGGGTCAAGG ACAGGGGCGC GTTTATGCAT
AACGTAATGC CCCTGATCTC AGAGCCTTCA AATGGTACTC TATATGGTCT GAACGGTCAG
CGTTGCCCTA CCCCTTCTGA GTTAATCGCG CTTCGGGACC GGCTTGAAGG CAACACGAAG
GTGATGCGCC ATTGCCGTCA GTGCCGTTCC GATGCAGTCG GTCTGCTCAG TGATGATCGC
GCACACGAAT TCACGATTTC CCAACTCCCA GCTGAAGCGA CCAACGACAG TGGCAAGCGC
CATGCCTATC GCAAGTTGAT CGAGCGCGAG CGACGCGGCC AAACATTGGA AGCAAGGGGC
GCGGCCATAC CGGTCTCAGC TCCATCTGAC GAACTTCTCC TTATTGCTGT AACCACCAAT
GGTGGAGGCC GGGTCAATGA ACATTTCGGT CATGCGCAGG AAATACAGAT TTTCTCGGTC
TGTAAAAAAG GCCTCGGATT GATAGGTCAC CTGAAGATCG ACCCGTACTG CCTTGGTGGA
TGGGGGGAGG AGGCTAGTCT CAACAGTATC ATCAATGCGC TCGAAGGCTT AGATTTGCTG
ATTTGTTCTC AGATCGGCAA TGGCCCTACG AATAAGCTCG CACGCCGAGG TGTTCGAGCA
ACGGGCGCTT ATGGCGGCTC CTACATCGAG CAGGCAATCG ACGCCCATTA TAGCGCGGTG
CTTCACGACG ACGCTTTAGC AGCCGCGATT TGA
|
|---|
| Protein sequence | MSRGMSTFRI TDTAPAACES EATAFGDYPP SSRGSSEPDA LAPAIREKIK DHPCFSREAH
LYFARMHLAV APACNIQCNY CNRKYDCANE SRPGVASHRL TPDQALRRAI AVANEVPQLS
VVGIAGPGDA CYDWRKTKAT LIPIAREITD VKLCISTNGL ALPEHVDELV DMNVGHVTIT
INMVDPKIGT EIYPWIFYDG RRYNGIDASR ILHERQMLGL EMLTERGILT KVNSVMIPGV
NDEHLIEVNK WVKDRGAFMH NVMPLISEPS NGTLYGLNGQ RCPTPSELIA LRDRLEGNTK
VMRHCRQCRS DAVGLLSDDR AHEFTISQLP AEATNDSGKR HAYRKLIERE RRGQTLEARG
AAIPVSAPSD ELLLIAVTTN GGGRVNEHFG HAQEIQIFSV CKKGLGLIGH LKIDPYCLGG
WGEEASLNSI INALEGLDLL ICSQIGNGPT NKLARRGVRA TGAYGGSYIE QAIDAHYSAV
LHDDALAAAI
|
|---|
| |