Gene Rleg_4920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4920 
Symbol 
ID8007516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp299267 
End bp300055 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content58% 
IMG OID644821840 
ProductABC-2 type transporter, NodJ family 
Protein accessionYP_002973100 
Protein GI241113265 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR01291] ABC-2 type transporter, NodJ family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGAG ATTCCGTAAC GGCTTTGCCG GGCGGCAGCT TGAACTGGAT TGCTGTCTGG 
CGCCGAAATT ATCTTGCATG GAAAAAGGCG GCGCTGGCGT CGCTTCTGGG GCATTTGGCC
GAACCTCTGA TCTACCTTTT TGGCCTTGGC GCTGGCTTGG GCGTGATGGT GGGCCGCGTT
GGGGGCGTTT CCTATACTGC TTTCCTGGCA GCTGGAATGG TCGCGACAAG TGCGATGACG
GCTGCAACGT TTGAGACGAT TTACGCAGCT TTCGGCCGGA TGGAGGGTCA GCGCACTTGG
GAAGCGATGC TCTACACACA GCTGAGGCTA GGCGATATTG TTCTCGGTGA GATGGCTTGG
GCGGCGACGA AGGCCGCTTT GGCGGGTGCC GGCATAGGCG TGGTCGCCGC CGCTCTAGGA
TACACGCAGT GGCTGTCGCT GCTGTATGCG CTTCCGGTCA TCGCGCTGAC GGGATTGGCC
TTTGCAAGCC TTGGGATGGT CGTCACCGCC CTTGCTCCGA GCTATGATTA TTTCATCTTC
TATCAGACGT TGGTTATCAC CCCCATATTA TTTCTCTCGG GTGCCGTCTT TCCAGTCGAC
CAACTGCCCA TTGTCTTCCA GACCGCGGCG CGATTTCTGC CCCTGTCGCA TTCAATCGAC
CTCATACGTC CGATCATGCT CGGTCACACC GTCGTCGATG TCTGCCTGCA CGTCGGCACA
CTTTGCATCT ACATCGTCAT CCCATTCTTT TTATCGACAG CCTTGCTGCG GCGCCGACTA
TTGCGCTGA
 
Protein sequence
MSGDSVTALP GGSLNWIAVW RRNYLAWKKA ALASLLGHLA EPLIYLFGLG AGLGVMVGRV 
GGVSYTAFLA AGMVATSAMT AATFETIYAA FGRMEGQRTW EAMLYTQLRL GDIVLGEMAW
AATKAALAGA GIGVVAAALG YTQWLSLLYA LPVIALTGLA FASLGMVVTA LAPSYDYFIF
YQTLVITPIL FLSGAVFPVD QLPIVFQTAA RFLPLSHSID LIRPIMLGHT VVDVCLHVGT
LCIYIVIPFF LSTALLRRRL LR