| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4880 |
|---|
| Symbol | |
|---|
| ID | 8007378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 260314 |
|---|
| End bp | 262455 |
|---|
| Gene Length | 2142 bp |
|---|
| Protein Length | 713 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644821808 |
|---|
| Product | helicase domain protein |
|---|
| Protein accession | YP_002973068 |
|---|
| Protein GI | 241113233 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1204] Superfamily II helicase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.756208 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGCTCG AGGACCTAAG GAGTTTTCTC ACTACCGGCT TTGGGCCTGA GCAAGCTGTG
TTGGTCCTCG GTGCCGTCAA CACGCTCGTC AATTCGCAAA GGACCCATGA CCTTGGTCGT
GAAATGGTCA TCCGATGCCT GGCAAAAAAG GACTTGTTTC CGCCTGGTCT GCTGCCACTC
CTCGAGTCCC TCGTCGGGTC GGTCGGGCTC ATCCCATATC TCTCGAAAGA CGTTTCGACG
TTCGAAGAGC AGTTGATGCT TGAAGCACAT CGAACGCCTG CGATCGGCAA GGTCGACTTT
TTCCATACGC TCCAACTCCA AATCTACCGG GAGCTGAGGT CAAAACGAAA CGTTGTATTG
AGCGCGACGA CCAGCGTCGG AAAGAGTGCT ATCGTGGATG CAATCATTGC TTCCGGCGAT
CACAAACACC TTACAATTAT CGTCCCGACG ATTGCCTTGA TCGACGAGAC GAGACGTCGC
ATTATCGAGA CATTCGGCTC ACGATACGCG ATCGTTACGC ACCCAACGCA GGTCTCGTCT
CGGGATAAAG CGACAGTGTT CGTCCTTACC CAGGAACGCG CTTTGAATCG CGACGATCTC
CAGGACGTGT CGTTCTTTGT GATAGATGAG TTCTACAAGC TCGACCTACA GATGGAGAAG
AGTATCGAGC GGGCCGTCGA TCTCAATCTT TGCTTCCACA AGCTCTCGTC CAACGGGGCT
CAATTCTACC TGATCGGTCC CCATGTAGAC GGCATCAACG GACTGGCGTC AAAACGGGAG
TTTCTGTTCC TACCGTCGCA TTTCTCGACG ATCGCGCTGG ATATCGTGCA GTACGGCCTG
CCAAGAGACG GTGGTGAACG AGAGGAGAAG TTGATCGAAC TCTGCGAGGA ACTCACCTCG
CCGACTTTGA TTTTTTGCCA ATCGCCAGGT TCAGCAAAGA GAGCCGCGGA AACGCTTCTT
GAGGCGGAAG GTTTGCTTCC TGAGACAGAT CTGACCTGGC CGGCCGTCGA GTGGCTGGAG
AAAGAATATC CTGAAGAATG GATCGTAACG CATGCGCTGC GCCGAGGCGT GGGCATTCAT
CACGGTAGCA TCCCCCGCGC CCTCCAACAG TACATGGTCA AGGCGTTCGA AACCGGGGCC
ATTAAATTTC TCATTTGCAC ATCGACGTTG ATCGAAGGAG TGAACACCGT CGCCGAGAAT
GTCATTATCT TTGACAAGCG GATCAAAAAC ACGGGCATCG ATTACTTCAC ATTTAGAAAC
ATTGCGGGGA GAGCCGGTCG GATGCGCCGG TATTTCGTCG GGAGAGTTTA CGTTCTTGAA
GAGCAACCAG AGCCAGACAC TTGCGTGATC GAGGTTGCCG TCGGCACTCA ATCCGAAACG
ACGCCAATGT CACTCTTGCT GGACCTCGAA GATGATGACC TAACGCCAGC CTCAAAAACT
CGCGTGGAGT CCGTTACGCG CGAGAGCCCA TTGTCCCTGG AAACCCTCAG GGCAAACCGC
AGAGTTCACA TCGAGAAGCA ATATGACATT TATGATGCAA TATGGCGTGA CACGTCACTG
CTTGGTAGGC CACTGGCCTG GCGAGGGGTG CCTGACTCGC CGCAGTTGCT GGCGGTATGC
AACCTGATTG TCGATTACTT GGACTCCGAA ATCCTCAAAG GTTACCAGAT TTTCTCCGGG
AAACAGTTGC AAGCAAAGCT TTATTCGGTT GAGAACAGCA AGAGCCTTCG CGAAGTAATC
GACGACTTCG TTGAACATCG AAGGCGTGAC GCTTCAGTTA GCGATGCGGT CGAACTTGCA
TTGCGCTTTC TCAGAAAATA CGTCGGATAC ACCTTCCCGC AGAGCCTAAT GGCAATCTCG
CACATCCAAG GTGATGTCTT GAGGAAAATC GGCGTCGAAC CCGGAAACTA CGAGTTCTAC
GCCGCCAAGG CCGAAAGCCT TTTCATGGAG CGCGGCCTCT TCGCGCTGGA CGAGTATGGC
ATTCCCCCCG AGACCGCGAT ACGGTTTGCT CCCGTCGCTC GCGAGTATCC CACGCTGGAT
AGTGCGATTG AGCTAGTCAA ACGGATGGAC CTCCGGGGGG TCGATCTTAC AAAGTTCGAA
CGCGATCTGA TCGATGACCT TCGCGCGTCG CTATTGTCAT AA
|
|---|
| Protein sequence | MLLEDLRSFL TTGFGPEQAV LVLGAVNTLV NSQRTHDLGR EMVIRCLAKK DLFPPGLLPL
LESLVGSVGL IPYLSKDVST FEEQLMLEAH RTPAIGKVDF FHTLQLQIYR ELRSKRNVVL
SATTSVGKSA IVDAIIASGD HKHLTIIVPT IALIDETRRR IIETFGSRYA IVTHPTQVSS
RDKATVFVLT QERALNRDDL QDVSFFVIDE FYKLDLQMEK SIERAVDLNL CFHKLSSNGA
QFYLIGPHVD GINGLASKRE FLFLPSHFST IALDIVQYGL PRDGGEREEK LIELCEELTS
PTLIFCQSPG SAKRAAETLL EAEGLLPETD LTWPAVEWLE KEYPEEWIVT HALRRGVGIH
HGSIPRALQQ YMVKAFETGA IKFLICTSTL IEGVNTVAEN VIIFDKRIKN TGIDYFTFRN
IAGRAGRMRR YFVGRVYVLE EQPEPDTCVI EVAVGTQSET TPMSLLLDLE DDDLTPASKT
RVESVTRESP LSLETLRANR RVHIEKQYDI YDAIWRDTSL LGRPLAWRGV PDSPQLLAVC
NLIVDYLDSE ILKGYQIFSG KQLQAKLYSV ENSKSLREVI DDFVEHRRRD ASVSDAVELA
LRFLRKYVGY TFPQSLMAIS HIQGDVLRKI GVEPGNYEFY AAKAESLFME RGLFALDEYG
IPPETAIRFA PVAREYPTLD SAIELVKRMD LRGVDLTKFE RDLIDDLRAS LLS
|
|---|
| |