Gene Rleg_4861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4861 
Symbol 
ID8007249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp241837 
End bp243003 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content59% 
IMG OID644821791 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002973051 
Protein GI241113216 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.580739 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA CCAGCGTTCG GCCGTGGCTA ATCAGATCCG ATGCTTCTTA TTGGGGAGAG 
TTTCTGTTCG TCGAAGTGAC GACCGACGAG GCGGTGAGCG GCTGGGGAGA GATCACCACC
ACGACAAGGC TCGCCAATCG CGCCCTCTGC ACGATCCTGC GCCAGATCGG TGCCGCTCTG
ACAGGCGAGG ACCCGGCGCG TATTGAGTAT CTGTGGCACA AGATTTTCCG CAGCTTCACC
TACATGGGCA GTCGCGGCGC CGCAGTCGAA TGCGTCAGCG CCATCGACAT AGCCCTTTGG
GACATCCAAG GCAAAGTCTT GGGCAAGCCG ATTTACGAGC TGTTGGGTGG ACCGGTACGC
GATGAAATCG CGCTCTACAC CCATCCCAAC CAGGCCAAGT TCACCAGCAA CGAGGCTGTG
GTCCGGGAAA TTCGAGACAT CGTCGAGTCC GGCCACACTG CGCTCAAGTT CGATCCTTTC
CCATACCAGG GCCGCAGCGG CGATGGACAG GCGCGCGAAC AGCGGGACGG CTACCTCGAC
GGCAGCATGA CCCGCAAGGA TGAGCGCGAA GCCGCCGAAC TCACGGCTTT GATCCGTGAA
ACGGCGGGCC CTGATGTCGA CATTCTCATC GATGCGCATG GCCGGTTCGA CGTTCCCACC
GCCATTCGCC TTTGTCGGAG CCTCGAGGAA GCTGGTCAGA TCGACTGGTT CGAGGAGCCC
TGTCCACCGG AGAGCCTCAA CGCTCTCAGA CAGGTCCGTG AGAAGGTCAG CGCGGCTATC
TCGTGGGGCG AGCGCGGCCA TACGAAGTGG GATTTCGTGC CGGTGCTCGA AAACAGGCTC
GCCGACTACA TCATGCCTGA TGTCACCTGG ACCGGCGGCA TTACCGAACT CAAGAAGATT
TCTGCCCTAT GCGAAGCCTA CTACATCCCG GTCTCGCCGC ATGACGCCGC AGGACCGATC
AACGTGGTTG CGGGAGCGCA GGTGATGATG ACCGTTCCCA ACTTCTATAA ACTCGAAACG
TCGGAGTGGA ACCTCGGCAA ATACGATCAT CTTATCGACA GACCACTCGA TGTTTCGAAC
GGCAGCCTCA AGCTTACGCC CAAGCCTGGT CTCGGCATTG AAATGAACCG CGACTACCTT
CAAAATCACG AGATAGAGCT GGATTAG
 
Protein sequence
MKITSVRPWL IRSDASYWGE FLFVEVTTDE AVSGWGEITT TTRLANRALC TILRQIGAAL 
TGEDPARIEY LWHKIFRSFT YMGSRGAAVE CVSAIDIALW DIQGKVLGKP IYELLGGPVR
DEIALYTHPN QAKFTSNEAV VREIRDIVES GHTALKFDPF PYQGRSGDGQ AREQRDGYLD
GSMTRKDERE AAELTALIRE TAGPDVDILI DAHGRFDVPT AIRLCRSLEE AGQIDWFEEP
CPPESLNALR QVREKVSAAI SWGERGHTKW DFVPVLENRL ADYIMPDVTW TGGITELKKI
SALCEAYYIP VSPHDAAGPI NVVAGAQVMM TVPNFYKLET SEWNLGKYDH LIDRPLDVSN
GSLKLTPKPG LGIEMNRDYL QNHEIELD