| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4841 |
|---|
| Symbol | |
|---|
| ID | 8007229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 216737 |
|---|
| End bp | 217735 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644821771 |
|---|
| Product | hydroxyproline-2-epimerase |
|---|
| Protein accession | YP_002973031 |
|---|
| Protein GI | 241113196 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3938] Proline racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.122801 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAACA GCTTCTTCTG TATCGATGCG CATACCTGCG GCAATCCCGT CCGCCTCGTT
GCCGGAGGCG GTCCGCTGCT TCCGCATGTG CCGATCGGTG AGCGACGGGA GATTTTTGTC
CGGGACCATG ACTGGGTGCG CCAGGCGCTG ATGTTCGAGC CAAGGGGGCA CGACATCATG
TCAGGCGCGA TCATCTATCC GGCCTATCGG GAAGATTGCG ATTTTGCCGT TCTTTTCATC
GAGGTGAGCG GCTGCCTGCC GATGTGCGGC GCCGGCACCA TCGGCACCGT GACCGCCGCG
ATCGAGGAGG GTCTCGTCAA GCCGCGGGAG CCGGGAAGGC TTGCCATCGA GACGCCTGCA
GGAAGGGTCG ACGTCACTTA TGAGGAGAAG GGCGGATATG TCGAAGCCGT TCGTCTCCAC
AATGTTGCGA GCTATCTGCA CGACGCTGAT GTCGAGGTCG ATGTGCCGGG AATGGGCCGT
CTGCGCGTCG ACATCTCCTA TGGCGGCAAC TATTATGCGG TCATCGAACC ACAGGATAAC
TGGAGCGGCC TCGATGGCAT GACCGCATCC GACATTGTCG GCTGCAGCCA GAAACTCAGG
TCAGCACTTG CCGGTATCTG CGATCCCGTT CATCCCGACG ACGTTAGGAT ACGCGGCGTG
CATCATGCGA TCTGGTGCGA CCGCCCGGTG AATGACGTCT CGGATGGACG CTGCGCCGTC
TTCTATGGCG AGAAGGCCAT CGATCGCTCG CCGGGCGGCA CCGGCACTTC CGCCCGCATG
GCCCAGCTCT ATGGGAAGGG ACGGCTTACC GTCGGGTCGA GATACCGGCA TGAAAGCCTG
ATCGGAACCG TCTTCGAGGG CCGGGTCGAA GCCGAGGCAC GCATTGGGCC CTACAGCGGT
ATTCTTCCAA GCATTGGAGG CTGGGCACGC GTCATCGGGC ACAACGCCAT TTTCGTTGAC
GACCGTGATC CGCTAGCGCA TGGCTTTCAG ATCCGATGA
|
|---|
| Protein sequence | MRNSFFCIDA HTCGNPVRLV AGGGPLLPHV PIGERREIFV RDHDWVRQAL MFEPRGHDIM
SGAIIYPAYR EDCDFAVLFI EVSGCLPMCG AGTIGTVTAA IEEGLVKPRE PGRLAIETPA
GRVDVTYEEK GGYVEAVRLH NVASYLHDAD VEVDVPGMGR LRVDISYGGN YYAVIEPQDN
WSGLDGMTAS DIVGCSQKLR SALAGICDPV HPDDVRIRGV HHAIWCDRPV NDVSDGRCAV
FYGEKAIDRS PGGTGTSARM AQLYGKGRLT VGSRYRHESL IGTVFEGRVE AEARIGPYSG
ILPSIGGWAR VIGHNAIFVD DRDPLAHGFQ IR
|
|---|
| |