| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4839 |
|---|
| Symbol | |
|---|
| ID | 8007227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 215024 |
|---|
| End bp | 215872 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644821769 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002973029 |
|---|
| Protein GI | 241113194 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.270529 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.113224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGTT CAGGCTTCAC CGATCTTTTT GACGAATGGA CGGACGCCGC GCTCGAGTGG
GTGAGCGACA ATGGCGAATT CCTTTTCGAT TCTATCAGAC AGCTTCTCGA AGGGCTCTAT
GACGGGATCC TCTGGCTCCT GCAGCTTCCG CCTTTCTACC TGGTCGCGCT GATCGTGGCG
CTCATCGGCT GGCGGTTGGT CAATGTCTGG TTCGCTCTGC TGAGCGGCGC TGCACTGGCG
CTTTGTTTTT CCATGGGCCT CTGGCCAGAG ACGATGAGCA CGCTGGCGCT GGTCTTGACC
GCAACCGCAC TCGCCCTGGC GATCGGGATC CCAATCGGTA TTGCCGCCGG ATTTTTCCCC
GCCCTCGATC GATTCATGGA GCCCGGCCTG GATCTTATCC AGACGCTTCC GCCATACATC
TATCTGCTGC CGGCGATCGC CCTGCTCGGC TACGGACCGG CGACGGCACT GATCGCGACG
GTGATCGTCG CCGTGCCGCC GGCGATCCGC CTGACGTCTC TCGGTATCCG GATGACGCCC
AAGGAGTTCA TCGAACTTGG AGAGGCGCTC GGGATGACGC CGGCGAAGAT GTTTTTCAAG
ATCCGCCTTC CCTTTGCGCT GCCGAGCATC ATGGCAGGCA TAAACCAGAG CCTGATGATG
GCCTTCGGCA TGGTCGTTAC CGCCGGCATC GTTGGCTCCG GCGGGCTTGG CGAAACGATC
TATGGCGCGA TCAGAACGCT CGACATCGCG ACCTCTATCA ACGGAGCGAT CGCCATCGTG
GTACTGACCA TGGTGCTTGA CCGGATAACC CAGAGCGCGG CTCGCTTGGG AACGGGGAGG
AAGTCATGA
|
|---|
| Protein sequence | MDSSGFTDLF DEWTDAALEW VSDNGEFLFD SIRQLLEGLY DGILWLLQLP PFYLVALIVA
LIGWRLVNVW FALLSGAALA LCFSMGLWPE TMSTLALVLT ATALALAIGI PIGIAAGFFP
ALDRFMEPGL DLIQTLPPYI YLLPAIALLG YGPATALIAT VIVAVPPAIR LTSLGIRMTP
KEFIELGEAL GMTPAKMFFK IRLPFALPSI MAGINQSLMM AFGMVVTAGI VGSGGLGETI
YGAIRTLDIA TSINGAIAIV VLTMVLDRIT QSAARLGTGR KS
|
|---|
| |