| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4814 |
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| Symbol | |
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| ID | 8007498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012848 |
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| Strand | + |
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| Start bp | 185726 |
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| End bp | 187612 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644821744 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002973004 |
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| Protein GI | 241113169 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.230957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATGGCA TCTGGACGCA ATTCGGTGGC AACCTGTCAT TCGTGTGCCT GGCGATTTCG
CTCTGGGCGC ATTTCTCGAT CCAATTTCAG CGTCGTTCGG TCACACAGGA AAAAATCGCC
TTCGGAATCA TAGCCGGCGG CGCCTCCATC GGCTCCATAT TGCTGGCCGT CGAAGTCAAT
CCCGGCATTT ATATCGACAT CCGCTTTTCG CCGCTTGCTT TGGCGGGCAT GTTCGGCGGA
CCGATCGCGG CCGCCTTTGC GGCGTCGCTG GCGATAGTCT TCCGCTTCTG GGTCGGCGGC
GCGGCAATGA TCGACGGTCT GATCGCAATT GCTGTCGCGA CCGGTATCGG CCTGGCTGCC
AACGTCTGGA TCCGCAAGAG ATCTCCCGAG CTCATAGACG TTGCGCTGCT GAGCCTCGCG
CTCGGCGGCG CACTTATTGT TTTGATGGCG GTGCTTCCCA CCCTGGTCCA CGCCCGCGTA
TTGGCCATCA TCGGTCTGCC GATGACGGTA TTGAACTGCC TGGCGACGGT GCTGTGTGGT
TTCGTTCTGT TGAAGACGCA ACAATGGGAG CTGGAGCGAA GCATCCTGGT GACCGCATTT
TCGCAGTCGC CCGATTATCT CTACGTGAAG GACCGAAACA GCCGGTTCAT CACCGTCAAC
GAAAATATGA TCCGCCTTTT TCGTTTCAGA ACCACGGCGG AGATGACCGG ATTGTCGGAT
TTCAATCTTA TCTCGCGGCC GCGCGCCGAA GAATTTTATT ATCTCGAACA ACAGGTCATG
GACACCGGGG TGCCCCTGAT CGACTCCGTC GAGCGTGTCG AAGACAGATA CCTGCTCGCC
TCCAAGGTGC CGCTGAAGGA TAGGCAGGGA CGGGTGATCG GCCTGGCCGG CGTCACGCGT
GACGTGACGG AGCGGACTGC TCTGGAGCGG GAATTGCGCA AGAGCAAGAA CCTGCTGTCA
CATGCGATGG CCGGCATGTC CGATGGCATC GCCATGTACG ACAGCAAGGG TTTTCTGGTT
TTTTGCAACG ACCAGTATCG CGCCGCCTTT CCGCTATCCG GAGACGCCCG CGTGGTTGGC
GCTCATATCA GCGACATCCT TCGTCGCGTT GCCGAAACCG GCGAGCGCAC GGGTATCCCG
GACGCTGACC GCGAAGAGTG GATCAGGTCC GTCAGTGCGA CGTTGCACAG CAACAAGGAC
GAAGAGGTTC AGCTTCACAA CGGCGACTGG CGCAGCATCC GGACGAGGTT AGCGGAAGAC
GGCACGGCGA TGGCCGTTGT CTCCGACATC ACGGCGACCA AGCAGGCGGA AATCGCCCTC
CGGCTGTCGG CGGAGCAGCT GAAGTCCCTC GCCGAGACCG ACGGGCTCAC CGGCATGGTC
AACCGCCGGG CCTTCGACGA GGCTTTCGCC CGCGAGACCG CAGGCAGCGC CAGGAAAAAC
ACGCCGTTCA GCCTTCTGAT GGTCGATATC GACCGCTTCA AGGCCTATAA CGACACCTAT
GGTCATCCCG CCGGGGACCA ATGCCTGCGT GTCGTCAGCA GGTGTCTTCG CCAGTCCGTA
AGCCGCCCGG CCGACATCGT CGCACGCTAC GGCGGAGAGG AATTCGTGGT TCTGCTGCCT
GCAACCAGTG CGAAGGGGGC GATGATCGTT GCCGAACAGT TCGCACGTCT CCTAAGCCAG
GAAAATATCG TTCATACCGG CAGCGAATTC GGCCGGGTGA CCGCCAGCAT CGGCATATCC
TGTGCGACGG GAGCCACCTT GAGGATCAAC CCGAACCGCC TCCTGAGCGA GGCCGATGCC
GCGCTCTACG ACGCCAAGAC TCAAGGCCGC AATCGCATCC TGGCACATTC GCCCGAGGAG
CGGCACGCCA TCAAGGACGT TGGTTAG
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| Protein sequence | MNGIWTQFGG NLSFVCLAIS LWAHFSIQFQ RRSVTQEKIA FGIIAGGASI GSILLAVEVN
PGIYIDIRFS PLALAGMFGG PIAAAFAASL AIVFRFWVGG AAMIDGLIAI AVATGIGLAA
NVWIRKRSPE LIDVALLSLA LGGALIVLMA VLPTLVHARV LAIIGLPMTV LNCLATVLCG
FVLLKTQQWE LERSILVTAF SQSPDYLYVK DRNSRFITVN ENMIRLFRFR TTAEMTGLSD
FNLISRPRAE EFYYLEQQVM DTGVPLIDSV ERVEDRYLLA SKVPLKDRQG RVIGLAGVTR
DVTERTALER ELRKSKNLLS HAMAGMSDGI AMYDSKGFLV FCNDQYRAAF PLSGDARVVG
AHISDILRRV AETGERTGIP DADREEWIRS VSATLHSNKD EEVQLHNGDW RSIRTRLAED
GTAMAVVSDI TATKQAEIAL RLSAEQLKSL AETDGLTGMV NRRAFDEAFA RETAGSARKN
TPFSLLMVDI DRFKAYNDTY GHPAGDQCLR VVSRCLRQSV SRPADIVARY GGEEFVVLLP
ATSAKGAMIV AEQFARLLSQ ENIVHTGSEF GRVTASIGIS CATGATLRIN PNRLLSEADA
ALYDAKTQGR NRILAHSPEE RHAIKDVG
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