| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4787 |
|---|
| Symbol | |
|---|
| ID | 8007040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 158848 |
|---|
| End bp | 159378 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644821717 |
|---|
| Product | TadE family protein |
|---|
| Protein accession | YP_002972977 |
|---|
| Protein GI | 241113142 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4961] Flp pilus assembly protein TadG |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0894541 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGAG GGAAACGCTT CGCATCGTTG CGCCGCCTGT TCGGCGATCG CAAAGGGGTT
GCTGCGATCG AATTTGCGAT CCTGGCTCTG CCGCTCTTCA TCATGATATT CGGCATTATC
GAAGTGTCGC TGATGTTCTT CGTCAACTCG GCGCTGGACG CATCCGTGCA CAAGATCTCC
CGAATGATCC GCACCGGCGA GGTTGCGTCC TCCAAGATCA CGCTGGCCGA TTTCAAGGCC
AGAATCTGCA ACGACATGCT TCTGTCGTTC AGCTGCTCCA GCGGTCTGCT GGTCAAGGTG
ATCGTGCTTT CCGACCTCTC GTCGGCCGCC AGCACCGACC CCATCGACGA CAGCGGCAAT
CTCACGGTCA CCGAGACCTA TGACATCGGC AAAGGCAGCG ATTACATCCT GGTTCAGACG
TTCCTGCCAT GGACAGCCGT CGTCAATTTC TTCAGCCTTT CGAGCGCCAA GCTTTCCGAC
GGCCGCTACC TGCTCGGATC TTCCGTTCTG TTCCGCAACG AGCCTTTCTG A
|
|---|
| Protein sequence | MRRGKRFASL RRLFGDRKGV AAIEFAILAL PLFIMIFGII EVSLMFFVNS ALDASVHKIS
RMIRTGEVAS SKITLADFKA RICNDMLLSF SCSSGLLVKV IVLSDLSSAA STDPIDDSGN
LTVTETYDIG KGSDYILVQT FLPWTAVVNF FSLSSAKLSD GRYLLGSSVL FRNEPF
|
|---|
| |